Query= MSMg01no363_m11.b1 MSMg01no363_m11.b1 CHROMAT_FILE:
MSMg01no363_m11.b1 PHD_FILE: MSMg01no363_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:36 2005
(296 letters)
>mm_chr3_148555562_148556257
Length = 696
Score = 543 bits (281), Expect = e-159
Identities = 293/297 (98%), Gaps = 1/297 (0%)
Strand = Plus / Minus
Query: 1 gttgacagaacagctcgacattgagctacccagttcctcccatggcttccacaagcagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gttgacagaacagctcgacattgagctacccagttcctcccatggcttccacaagcagaa 363
Query: 61 gattcacttagatctatacctgtggccctgcacgctgacaaaggccaaaattaaagctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gattcacttagatctatacctgtggccctgcacgctgacaaaggccaaaattaaagctta 303
Query: 121 gaaatcacacaactttacaatcagttgtcttcgacaaaatagtaccaagtgtgaattatg 180
|||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 302 gaaagcacacaactttacaatcagttgttttcaacaaaatagtaccaagtgtgaattatg 243
Query: 181 ctccaagccaatcttttagtagcatgttgtaatatttctaagattttataataatatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctccaagccaatcttttagtagcatgttgtaatatttctaagattttataataatatgat 183
Query: 241 ttattca-tttttattatggaattataattgcaaatcacctctgtgttaaagtaggt 296
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttattcattttttattatggaattataattgcaaatcacctctgtgttaaagtaggt 126
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no363_m11.g1 MSMg01no363_m11.g1 CHROMAT_FILE:
MSMg01no363_m11.g1 PHD_FILE: MSMg01no363_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:36 2005
(269 letters)
>mm_chr3_148363393_148364061
Length = 669
Score = 489 bits (253), Expect = e-143
Identities = 265/269 (98%)
Strand = Plus / Plus
Query: 1 aggtgggattcagctctgtaagagactgatggtgcatgttgtgccgtgttccttaacttc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 aggtgggattcagctctgtaagagactgatggtgcatgttgtgccctgttccttaacttc 260
Query: 61 cactggatatgtggaaagataaatcccaacagaaatgtgtgtgtgcaggcctgtgattct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactggatatgtggaaagataaatcccaacagaaatgtgtgtgtgcaggcctgtgattct 320
Query: 121 gctcttgagctgtgactctttccagttccaagtgtcctctccaaggtgaagtaattctga 180
|||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 321 gctcttgagctgtgactctttccagttccaagtgtcctctccaaggtgaaatagtcctga 380
Query: 181 gctgctctgcctacaacaaatgaaccccactgtttcccaccattccttactgtttccact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgctctgcctacaacaaatgaaccccactgtttcccaccattccttactgtttccact 440
Query: 241 gaatgtcccttatcacagctaaaatcaaa 269
|||||||||||||||||||||||||||||
Sbjct: 441 gaatgtcccttatcacagctaaaatcaaa 469
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space: 171600
Effective search space used: 171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
