Query= MSMg01no364_b19.b1 MSMg01no364_b19.b1 CHROMAT_FILE:
MSMg01no364_b19.b1 PHD_FILE: MSMg01no364_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:05 2005
(414 letters)
>mm_chr3_130400203_130401016
Length = 814
Score = 748 bits (387), Expect = 0.0
Identities = 405/411 (98%)
Strand = Plus / Minus
Query: 4 ggaattccacggtggttgtgagccaccatgtaggttctggggattgaacccaggtcctcg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ggaattccacggtggttgtgagccaccatgtaggttctggggattgaacccaggtcctcg 663
Query: 64 aagagcagcccgtgctcttaactgctgagtcatctctagtccagtccccttcccatcccc 123
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aagagcagcctgtgctcttaactgctgagtcatctctagtccagtccccttcccatcccc 603
Query: 124 actgtttcttaaggttgatagtccacaagagtaggtcacacactgctttcaggaaggact 183
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 602 actgtttcttaaggttgatagtccacaagagtaggtcacacactgctttcaagaaggact 543
Query: 184 agagcagggtttaactgtcaccagatggggctttgaagtgcatattcacatcacacagca 243
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agaacagggtttaactgtcaccagatggggctttgaagtgcatattcacatcacacagca 483
Query: 244 gatgacagggacctgtccctaaagagccccctagtgtaagccggtgtcaaggtgcctgcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gatgacagggacctgtccctaaagagccccctagtgtaagccggtgtcaaggtgcctgcc 423
Query: 304 ttgtttggctgatgtggccgcttgccgacagtgatccagagcctatctgtgctgggaaat 363
||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||
Sbjct: 422 ttgtttggctgatgtggccgcttgctgacagtgatccagagcctgtctatgctgggaaat 363
Query: 364 tgctttcttgttctgtttttgtttgaatgcatcagaccttatgatagggaa 414
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgctttcttgttctgtttttgtttgaatgcatcagaccttatgatagggaa 312
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_b19.g1 MSMg01no364_b19.g1 CHROMAT_FILE:
MSMg01no364_b19.g1 PHD_FILE: MSMg01no364_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:05 2005
(413 letters)
>mm_chr3_130261368_130262180
Length = 813
Score = 712 bits (368), Expect = 0.0
Identities = 402/416 (96%), Gaps = 6/416 (1%)
Strand = Plus / Plus
Query: 1 aaattgtaaagtggctcacctgcataaaattttgtagttctgctctctagttaaaaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaattgtaaagtggctcacctgcataaaattttgtagttctgctctctagttaaaaatac 260
Query: 61 agtgcatgatggaaggacagtggtgaagaaattctctttactctataatttccttgtgtt 120
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 aatgcatgatggaaggacagtggtgaagaaattctctttactctatcatttccttgtgtt 320
Query: 121 agtaaatgacttatttacatcctaggagcaaagcggctttatcgctataaatccaacttt 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 agtaaatgacttatttacatcctaggagcaaagcagctttatcgctataaatccaacttt 380
Query: 181 tgtgtctggacaaacctctttaaaatagcattagtgttgccttgtacagtacctatctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgtctggacaaacctctttaaaatagcattagtgttgccttgtacagtacctatctga 440
Query: 241 tgccataaaattctggatacatataaaaacttgctcttggtttattaacatttttgcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgccataaaattctggatacatataaaaacttgctcttggtttattaacatttttgcttt 500
Query: 301 tgtctcagaaacatcaaactctttttgcttcattacctgaagccataaacacactgactg 360
||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||
Sbjct: 501 tgtctcagaaacatcaaactctttttgctacgttacctgaagcaataaacacactgacta 560
Query: 361 cttttattat---acaatgggaactttaatcatctcactcctgtagatttaaagtg 413
|||||||||| ||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 561 cttttattatgctaca---ggaactttaatcatctaactcctgtagatttaaagtg 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
