Query= MSMg01no364_l07.b1 MSMg01no364_l07.b1 CHROMAT_FILE:
MSMg01no364_l07.b1 PHD_FILE: MSMg01no364_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:55 2005
(274 letters)
>mm_chr3_82690440_82691113
Length = 674
Score = 530 bits (274), Expect = e-155
Identities = 274/274 (100%)
Strand = Plus / Plus
Query: 1 agagcactgaatggtcttaaccactgagccatctctccagcttctgatgtatgcttctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagcactgaatggtcttaaccactgagccatctctccagcttctgatgtatgcttctta 260
Query: 61 attaaagactaggaggtcagacttgattaatcattgagcagaggtgagacatgatgccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attaaagactaggaggtcagacttgattaatcattgagcagaggtgagacatgatgccca 320
Query: 121 atactgtgctccattttttaattctgtggcagtgtgaataagaataggcctcacaggtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atactgtgctccattttttaattctgtggcagtgtgaataagaataggcctcacaggtcc 380
Query: 181 acgtatttgagagcttagtcaccagggagtggcgctatttaaaaggattggaaggattag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acgtatttgagagcttagtcaccagggagtggcgctatttaaaaggattggaaggattag 440
Query: 241 gaggtgtagcttggtggagaaagtggagaaagtt 274
||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggtgtagcttggtggagaaagtggagaaagtt 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no364_l07.g1 MSMg01no364_l07.g1 CHROMAT_FILE:
MSMg01no364_l07.g1 PHD_FILE: MSMg01no364_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:55 2005
(411 letters)
>mm_chr3_82881406_82882221
Length = 816
Score = 659 bits (341), Expect = 0.0
Identities = 371/383 (96%), Gaps = 7/383 (1%)
Strand = Plus / Minus
Query: 34 cacaaaggtgtcctctgccctccaaacacaaactgcagtgctcatgcatgcgtggaacaa 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 cacaaaggtgtcctctgccctccaaacacaaactgcagtgctcatgcatgcgtggaacaa 757
Query: 94 taaaaatagtaaataaatatttttcagacgtcccataactgactgtggtgatggtagcat 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 taaaaatagtaaataaatatttttcagacgtcccataactgactgtggtgatggtagcat 697
Query: 154 aactctgtgaactaaaatctacagaattgtatatcggaagagggtgggctgaactctatg 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 aactctgtgaactaaaatctacagaattgtatatcggaagagggtgggctgaactctatg 637
Query: 214 tgaatatctcaataatgttatattttaattattttatg-tttttttcacac--gtatata 270
|||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 636 tgaatatctcaataatgttatattttaattattttatggtttttttcacacatgtatata 577
Query: 271 ataaatttttagttgttttttt---ccctcttctcattacttctcatacgatccccctct 327
||||| |||||||||||||||| | | |||||||||||||||||||||||||||||||
Sbjct: 576 ataaaattttagttgttttttttttctc-cttctcattacttctcatacgatccccctct 518
Query: 328 ttcttatcaaagatcccctcgctctatctttgtggataacccagtgcgtttaactaggca 387
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 517 ttcttatcaaagatcccctcgctctatctttgtggataaaccagtgcatttaactaggca 458
Query: 388 tggttatggaaggggagctgtct 410
|||||||||||||| ||||||||
Sbjct: 457 tggttatggaagggaagctgtct 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 816
Length adjustment: 9
Effective length of query: 402
Effective length of database: 807
Effective search space: 324414
Effective search space used: 324414
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
