GGGTCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTACAGTCTCTTGAAAGACCATAACGCCTAGGAACTAGCAAA
TCTATTCCTAAAAGAAATTAAAATATCCATCCCACAAAAGATTTCTATAC
AAACAACCATGTCGGCCTTATTCAGAATAATCAATAACTAGAAAGTGTCA
ACTGTCCATCTACAGAGAGTGAAAAATAATTGAAGCTATATGTTGGGATA
TAAAAATGCCTGTGAAACATAAAACAGTGAGCGATTGATGCATGCAATTG
TGTGAACCTCAAAAAGATGTTAATCAAATACATGGAAAGAATACATACTT
AAATTGAATACATACTTAAATACATTGAAGCCCGAGTTACATGCAAGGGA
TCTTCAGTTACAAGGCACGGGCCTGCAATATCCTGTTTAGTTTGGGTTGT
CAGTTTTTTGTTGTTGTTGTTGTTTTTTAATATACACAATTGCCAAATGT
ATCAATCCAATCCTGAACCTTTCTACTGTCCTTTCATTTCATTGCTTCTG
AATTATTGCTTAATGAAAATAAAAAGTAAAAATAATCCGCTCCTTGAAAA
AATATTAGGAGGGATCCCAATTTTCCATAACTTGGTTTATATAGAGACCG
TATTTAATATCGTTTAATGGACCTGTCTTTTCCCTTCGATATAATACTTG
GCACATTTCTCGATCTACCTTCTTTTCCCCCTCTCGTAGCCCACCGGTTC
TTATAATTGGCGTTATAGTN

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAATCATTTTCCTTTCCTTTTCCTT
TCCTTTGGCAGGACCGTTACAGGAGTTTGCCTTGAATCCCCCATTCCATC
CCCACATTCCTATTGTCACATCTGTCCTGACTGCACCACAATGCCCAGTG
ATAGTATGCATTCCAGGAGTACAAACTGAATGAGATAACAATGGACAGAT
ACCACATGTCTATCTGCTCTAGCTACTGAGATGAGTATGGAAGGAGTCAC
TGGCCTCAGTCAGCTAACTGTGCACTATGGAATATAGAAGAAGCCACAAA
ACAGATTAATAAACCATCGGAGTTATTCACTGGTTTTCATGGAAGGGAGA
GGTGCTACAACCCCCCTAGGAGAGACCATCTGATTTCGCTGGGTTTGATG
GAGACTTAAAGGACATACAAAAGAGAGCCAAACAAACAAACAAACAAATA
AACAGTCTACCAGGTAGACACAAAATGAAAGAGAGTGGTTTTTGTGTCAT
GGGCCAAAGTTTAACTGATAAATGTCCAGACACACATTANAAAGGTAGTC
AGTGGTTAGGCTGTGAAAGAACTTATGTGCTATGCCTTCCAAAAGGAATT
GGACTTGACAAAAAAAAAAAAGTGTAAACCCGGGGGAATTATGAGATTCC
TGTGGATACAAGTTATTGAGTTTAAAATTGGAGCAGAAAAAAATAAAAGA
AAACTTTTCTGTATTGTTTTCA

Query= MSMg01no364_n05.g1 MSMg01no364_n05.g1 CHROMAT_FILE:
MSMg01no364_n05.g1 PHD_FILE: MSMg01no364_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:05 2005
         (497 letters)



>mm_chr3_148123025_148123921
          Length = 897

 Score =  953 bits (493), Expect = 0.0
 Identities = 496/497 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatcattttcctttccttttcctttcctttggcaggaccgttacaggagtttgccttgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aatcattttcctttccttttcctttcctttggcaggaccgttacaggagtttgccttgaa 543

                                                                       
Query: 61  tcccccattccatccccacattcctattgtcacatctgtcctgactgcaccacaatgccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tcccccattccatccccacattcctattgtcacatctgtcctgactgcaccacaatgccc 483

                                                                       
Query: 121 agtgatagtatgcattccaggagtacaaactgaatgagataacaatggacagataccaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 agtgatagtatgcattccaggagtacaaactgaatgagataacaatggacagataccaca 423

                                                                       
Query: 181 tgtctatctgctctagctactgagatgagtatggaaggagtcactggcctcagtcagcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgtctatctgctctagctactgagatgagtatggaaggagtcactggcctcagtcagcta 363

                                                                       
Query: 241 actgtgcactatggaatatagaagaagccacaaaacagattaataaaccatcggagttat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 actgtgcactatggaatatagaagaagccacaaaacagattaataaaccatcggagttat 303

                                                                       
Query: 301 tcactggttttcatggaagggagaggtgctacaacccccctaggagagaccatctgattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcactggttttcatggaagggagaggtgctacaacccccctaggagagaccatctgattt 243

                                                                       
Query: 361 cgctgggtttgatggagacttaaaggacatacaaaagagagccaaacaaacaaacaaaca 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgctgggtttgatggagacttaaaggacatacaaaagagagccaaacaaacaaacaaaca 183

                                                                       
Query: 421 aataaacagtctaccaggtagacacaaaatgaaagagagtggtttttgtgtcatgggcca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aataaacagtctaccaggtagacacaaaatgaaagagagtggtttttgtgtcatgggcca 123

                            
Query: 481 aagtttaactgataaat 497
           |||||||||||||||||
Sbjct: 122 aagtttaactgataaat 106


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space:   431969
Effective search space used:   431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)