AGGGATCTAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAA
AATGCTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTG
AGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGA
CAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTT
GGTGGGATTGCAGGCTTGTACAACCACTCTGGAGATCAGTCTGGCGGTTC
CTCAGAAAACTGGATATAGTACTACCGGAGGATCCACCAATACCTCTCCT
GGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCA
CTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAGGAACCC
AGATGCCCCTCAACAGAGGAATGGATACAGAAGATGTGGTACATCTACAC
AATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTGG
CCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCA
CAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAA
AACCTAAGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAACT
CAAGAAAAATGAAGACTGAAGTGTGAACACTATGCCCCCTCCTA

NNCCCGATGATNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTTGTTCTGTGGCACCTGACACT
ATGAGGCTTTAAGGACCCATTCAGTCCCATGTTTGGAATTCTGCATAAAA
AAGGACAGGAAAGCCCTGAGGAAGGCCTTGATTAGGTGCGGATCACGATT
AGGAAGTAAAAAGAACTGCAGGCAGAATCCAAAGCTGGATGCTTCTCCAG
TCTCTGCTACCAGCTACCTCTCCCAGCATGGATAACTCAGCTTGTTCTTG
TAGCCTCGGTTTCCTCATTTGTGAGCTGTGGGTATTGGAGACAATGAAGG
AAAGTCTGTGATCGCCACTGTCAGATTCTGCCGAACATCCGGTGCCAGAA
AAACAAGCCTTGGAGCAAGTTATCAAATGTTCTCACATAATAAGAAACAG
CACTTCATTAAAACTACCCCTCCCTGGGGGGGTCTAAGTGAGCCTGAGAA
GCCCAAACACCCGGCGTATTATGCATCCAGTTGATCACAATTTATCCACA
GAATATCTTTTTTGACATTTAAGAAAGGTCAAAATTCTCTAGTGCTTAAT
AGGAATGGTAATGTCCTTTGAAATGGTATGGCGCCTTGGTTATGTAGAAT
CCTTCCAAGGTCCCCCAGGACTGGTAAAGTGAATGACAATGACCTTGGGC
TCCTGGCGTGGGTCTTAATCGGAGCGGCTTAGGTGGTAATAGGGACCAN

Query= MSMg01no366_e02.g1 MSMg01no366_e02.g1 CHROMAT_FILE:
MSMg01no366_e02.g1 PHD_FILE: MSMg01no366_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:03 2005
         (531 letters)



>mm_chr3_78683262_78684191
          Length = 930

 Score =  957 bits (495), Expect = 0.0
 Identities = 522/531 (98%), Gaps = 3/531 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttgttctgtggcacctgacactatgaggctttaaggacccattcagtcccatgtttgga 60
           |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 201 cttgttctgtggcacctgacactatgaggctggaaggacccattcagtcccatgtttgga 260

                                                                       
Query: 61  attctgcataaaaaaggacaggaaagccctgaggaaggccttgattaggtgcggatcacg 120
           ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 attctgcataaaaaa-gacaggaaaggcctgaggaaggccttgattaggtgcggatcacg 319

                                                                       
Query: 121 attaggaagtaaaaagaactgcaggcagaatccaaagctggatgcttctccagtctctgc 180
           ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 320 attaggaagtaaaaagaactgcaggcagaatccaaagccagatgcttctccagtctctgc 379

                                                                       
Query: 181 taccagctacctctcccagcatggataactcagcttgttcttgtagcctcggtttcctca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taccagctacctctcccagcatggataactcagcttgttcttgtagcctcggtttcctca 439

                                                                       
Query: 241 tttgtgagctgtgggtattggagacaatgaaggaaagtctgtgatcgccactgtcagatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttgtgagctgtgggtattggagacaatgaaggaaagtctgtgatcgccactgtcagatt 499

                                                                       
Query: 301 ctgccgaacatccggtgccagaaaaa-caagccttggagcaagttatcaaatgttctcac 359
           |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 500 ctgccgaacatccggtgcca-aaaaagcaagccttggagcaagttatcaaatgttctcac 558

                                                                       
Query: 360 ataataagaaacagcacttcattaaaactacccctccctgggggggtctaagtgagcctg 419
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ataataggaaacagcacttcattaaaactacccctccctgggggggtctaagtgagcctg 618

                                                                       
Query: 420 agaagcccaaacacccggcgtattatgcatccagttgatcacaatttatccacagaatat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agaagcccaaacacccggcgtattatgcatccagttgatcacaatttatccacagaatat 678

                                                              
Query: 480 cttttttgacatttaagaaaggtcaaaattctctagtgcttaataggaatg 530
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cttttttgacatttaagaaaggtcaaaattctctagtgcttaataggaatg 729


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 930
Length adjustment: 10
Effective length of query: 521
Effective length of database: 920
Effective search space:   479320
Effective search space used:   479320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)