Query= MSMg01no366_e06.b1 MSMg01no366_e06.b1 CHROMAT_FILE:
MSMg01no366_e06.b1 PHD_FILE: MSMg01no366_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:04 2005
(464 letters)
>mm_chr3_84200726_84201589
Length = 864
Score = 716 bits (370), Expect = 0.0
Identities = 409/442 (92%), Gaps = 32/442 (7%)
Strand = Plus / Minus
Query: 23 gcctgggttaaataataaaatcacatcttttttttaaaaagcaatgttaaggtccagtaa 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gcctgggttaaataataaaatcacatcttttttttaaaaagcaatgttaaggtccagtaa 797
Query: 83 attggccaggaggtaaaaggatgatgacctgagttggactcccagaaggcatttgtggaa 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 attggccaggaggtaaaaggatgatgacctgagttggactcccagaaggcatttgtggaa 737
Query: 143 gtagagctgtcatctacaagtcatcctgatatctacacacacacacacacatacacacac 202
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 736 gtagagctgtcatctacaagtcatcctgatatctac----------------acacacac 693
Query: 203 acacacacacacacacacacacacacacatacacacacacacaaagtaaataactaattc 262
|||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 692 acacacacacacacacacacacacacac----------------agtaaataactaattc 649
Query: 263 agaatggtgtggtaaactcttggtggaatagaaccaagagaattaggagagcacaagaaa 322
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 agaatggtgtggtaaactcatggtggaatagaaccaagagaattaggagagcacaagaaa 589
Query: 323 tacattcatgatttgatttcccagttctagggttaagggtgtgttaaggaatatttgaat 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tacattcatgatttgatttcccagttctagggttaagggtgtgttaaggaatatttgaat 529
Query: 383 caagtcattgcttctctttataatcactaaaatttctatggattgaaaatattcttgaga 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 caagtcattgcttctctttataatcactaaaatttctatggattgaaaatattcttgaga 469
Query: 443 attttaacagataatggatcac 464
||||||||||||||||||||||
Sbjct: 468 attttaacagataatggatcac 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_e06.g1 MSMg01no366_e06.g1 CHROMAT_FILE:
MSMg01no366_e06.g1 PHD_FILE: MSMg01no366_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:04 2005
(390 letters)
>mm_chr3_84027440_84028229
Length = 790
Score = 723 bits (374), Expect = 0.0
Identities = 386/390 (98%)
Strand = Plus / Plus
Query: 1 atccacgcactgaacatgcaaaggctgggaggtcagctggatcacagcattgggagcctg 60
||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 201 atccatgcactgaacatgcaaaggctggggggtcagctggattacagcattgggagcctg 260
Query: 61 gatcagaactgcgggagcctggagtgagagcgggactatgggagttattccattgtaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatcagaactgcgggagcctggagtgagagcgggactatgggagttattccattgtaatg 320
Query: 121 tgtctccaaaatactcatgtgttaaaggcttggttcccaatgtcccagggttttgaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtctccaaaatactcatgtgttaaaggcttggttcccaatgtcccagggttttgaaaaa 380
Query: 181 gtgattgaattgtgtcttgactttatcaagggtttaacccattgacagcttcatcatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgattgaattgtgtcttgactttatcaagggtttaacccattgacagcttcatcatttg 440
Query: 241 atggcattattcaggggtgatggaattaggaggtgggcctacttagagagagtatattgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atggcattattcaggggtgatggaattaggaggtgggcctacttagagagagtatattgc 500
Query: 301 aggcatgacttagataatcttgtcctgacctgtgctcccactttctggccaacctgctcc 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 aggcatgacttagataatcttgtcctgacctgtgttcccactttctggccaacctgctcc 560
Query: 361 attctccccttccccatgttgctgattggg 390
||||||||||||||||||||||||||||||
Sbjct: 561 attctccccttccccatgttgctgattggg 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
