Query= MSMg01no366_o10.b1 MSMg01no366_o10.b1 CHROMAT_FILE:
MSMg01no366_o10.b1 PHD_FILE: MSMg01no366_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:52 2005
(244 letters)
>mm_chr3_7799805_7800448
Length = 644
Score = 470 bits (243), Expect = e-137
Identities = 243/243 (100%)
Strand = Plus / Plus
Query: 1 gaaaagaaaaataatcctgtgctgtacagttaattgaaattgatattttcattgtgccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaaagaaaaataatcctgtgctgtacagttaattgaaattgatattttcattgtgccct 260
Query: 61 tctagtttttccaaatatttatgaatgcacataagtgattgtatctgtattatgtttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctagtttttccaaatatttatgaatgcacataagtgattgtatctgtattatgtttgtt 320
Query: 121 ttacctattaccaaaattttcatcctcttattctctttagtagatgtgagagtcaaacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacctattaccaaaattttcatcctcttattctctttagtagatgtgagagtcaaacca 380
Query: 181 ttggttcacttgtaaccttatatgttacttctttttaatttggggtatcatttattcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggttcacttgtaaccttatatgttacttctttttaatttggggtatcatttattcaga 440
Query: 241 gat 243
|||
Sbjct: 441 gat 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no366_o10.g1 MSMg01no366_o10.g1 CHROMAT_FILE:
MSMg01no366_o10.g1 PHD_FILE: MSMg01no366_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:52 2005
(235 letters)
>mm_chr3_7938826_7939458
Length = 633
Score = 323 bits (167), Expect = 6e-93
Identities = 220/253 (86%), Gaps = 27/253 (10%)
Strand = Plus / Minus
Query: 5 aaagacaaataaaaggtcatttgaaagtactctacacagctatatagagaggaatgtatc 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 351 aaagacaaataaaaggtcatttgaaagtactctacaaagctatatagagaggaatgtatc 292
Query: 65 acaac-tttttttttgattagttaaaatatattcttactatttttaggacgtccctggat 123
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 291 acaacttttttttttgattagttaaaatatattcttactatttttaggacgtccctgaat 232
Query: 124 aaaaaa--aaaacaaaaca-----------------------aaacacacacacaaaaaa 158
|||||| ||||||||||| | ||||||||||| ||||
Sbjct: 231 aaaaaaacaaaacaaaacacacacacacacacacacacacacacacacacacacacaaaa 172
Query: 159 aaaccagactgatttttactttctaaagtaaccagtttatcattataaaataacaactta 218
||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 aaa-cagactgacatttactttctaaagtaaccagtttatcattataaaataacaactta 113
Query: 219 gcttgaagaatta 231
|||||||||||||
Sbjct: 112 gcttgaagaatta 100
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 633
Length adjustment: 9
Effective length of query: 226
Effective length of database: 624
Effective search space: 141024
Effective search space used: 141024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
