Query= MSMg01no367_e18.b1 MSMg01no367_e18.b1 CHROMAT_FILE:
MSMg01no367_e18.b1 PHD_FILE: MSMg01no367_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:24 2005
(532 letters)
>mm_chr3_44512421_44513352
Length = 932
Score = 878 bits (454), Expect = 0.0
Identities = 460/462 (99%)
Strand = Plus / Minus
Query: 71 ctctgactctgtgaataataatgtctggctgtgagtctctatatttgtccacatctgctg 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ctctgactctgtgaataataatgtctggctgtgagtctctatatttgtccacatctgctg 873
Query: 131 ctggaggaagcttctattatgacgactgagtaaggcacacatttatgaagatagcagaac 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 ctggaggaagcttctattatgacgactgagtaaggcacacatttatgaagatagcagaac 813
Query: 191 atcactaggagtcattgtattgctatgttcactttgcaggaagagaagtatttgcttttc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 atcactaggagtcattgtattgctatgttcactttgcaggaagagaagtatttgcttttc 753
Query: 251 tctaaggcccctggcttatcactatataggattccaggagagattctctgaacatttgat 310
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 752 tctaaggcccctggcttatcactagataggatcccaggagagattctctgaacatttgat 693
Query: 311 tagatggaatttgaggagaggtaaaatgaggtaaaacttttaatattgttcctcaggctt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tagatggaatttgaggagaggtaaaatgaggtaaaacttttaatattgttcctcaggctt 633
Query: 371 atgacacttttacatgtgtttcccacaacagtagcctagcactccagaatatatgtcttt 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 atgacacttttacatgtgtttcccacaacagtagcctagcactccagaatatatgtcttt 573
Query: 431 tgtgtgctttacatatactgaaaatacagaatttcttagaataacagatgaaagagtctc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tgtgtgctttacatatactgaaaatacagaatttcttagaataacagatgaaagagtctc 513
Query: 491 tgctagaacacttaattagaaaaatgagaagagaagaaaaat 532
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tgctagaacacttaattagaaaaatgagaagagaagaaaaat 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_e18.g1 MSMg01no367_e18.g1 CHROMAT_FILE:
MSMg01no367_e18.g1 PHD_FILE: MSMg01no367_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:24 2005
(463 letters)
>mm_chr3_44391208_44392070
Length = 863
Score = 874 bits (452), Expect = 0.0
Identities = 461/464 (99%), Gaps = 2/464 (0%)
Strand = Plus / Plus
Query: 1 ttaataaagtcctaaattaaaaactcagtaacctggagcatgttctttgaacatgctaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaataaagtcctaaattaaaaactcagtaacctggagcatgttctttgaacatgctaat 260
Query: 61 tatggaactcaattattgccataatttaatagttcactgtttcctatataactgggcaac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 -atggaactcaattattgccataatttaatagttcactgtttcctatataactgggcaac 319
Query: 121 atactaaaataagtttgagaattacctccctagacgatcataaaagttatctggttaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atactaaaataagtttgagaattacctccctagacgatcataaaagttatctggttaaca 379
Query: 181 ctcctttgttatttcatactgtgccatatgactccaaaccaatacaggcacaaaatgggt 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctcctttgtaatttcatactgtgccatatgactccaaaccaatacaggcacaaaatgggt 439
Query: 241 gtgatttatctgatctgaaaaacttttgaaccttgctggagtaacctatcgttattatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtgatttatctgatctgaaaaacttttgaaccttgctggagtaacctatcgttattatct 499
Query: 301 ggggcctgactaaacgacattgggtttcattatatttctttttttttt-ctaagtttaga 359
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 500 ggggcctgactaaacgacattgggtttcattatatttctttttttttttctaagtttaga 559
Query: 360 aaggaagtaatttgtctttgatgcaaaacagaaagcaaagagcttatttgagcactgtga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaggaagtaatttgtctttgatgcaaaacagaaagcaaagagcttatttgagcactgtga 619
Query: 420 agaaaataaaaaagaagaggctgacctggtgaaaattacatatt 463
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agaaaataaaaaagaagaggctgacctggtgaaaattacatatt 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
