Query= MSMg01no367_p21.b1 MSMg01no367_p21.b1 CHROMAT_FILE:
MSMg01no367_p21.b1 PHD_FILE: MSMg01no367_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:18 2005
(216 letters)
>mm_chr3_104375140_104375755
Length = 616
Score = 371 bits (192), Expect = e-107
Identities = 210/216 (97%), Gaps = 2/216 (0%)
Strand = Plus / Plus
Query: 2 aaaacaaaaaacaaaataacacagagctctcatctatgcaggcaaactctaaaaactctg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aaaacaaaaaacaaaataacacagagctctcatctatgcaggcaaactctaaaaactctg 261
Query: 62 tcaattcaggggtgtttgctgaccatcttcctcatgtgtgggcttcaagtctcacttaaa 121
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tcaattcatgggtgtttgctgaccatcttcctcatgtgtgggcttcaagtctcacttaaa 321
Query: 122 ggtagacttggaggtgcatcttcttgcaccaatgtgcttgtgattaacacacttcaaggc 181
|| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 322 ggcagacttggtggtgcatcttcttgcaccaacgtgcttgtgattaacacacttcaaggc 381
Query: 182 cctaactgctccagctgtggt-cctctttctcttac 216
||||||||||||||||||||| || |||||||||||
Sbjct: 382 cctaactgctccagctgtggtgcc-ctttctcttac 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 216
Length of database: 616
Length adjustment: 9
Effective length of query: 207
Effective length of database: 607
Effective search space: 125649
Effective search space used: 125649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no367_p21.g1 MSMg01no367_p21.g1 CHROMAT_FILE:
MSMg01no367_p21.g1 PHD_FILE: MSMg01no367_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:19 2005
(488 letters)
>mm_chr3_104604761_104605648
Length = 888
Score = 905 bits (468), Expect = 0.0
Identities = 482/487 (98%)
Strand = Plus / Minus
Query: 1 ctatttcagaaggtatgggcaaagagcaggcaggataagattcctgtccccccaaaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ctatttcagaaggtatgggcaaagagcaggcaggataagattcctgtccccccaaaacat 428
Query: 61 gccagagcagggcagtgtgttttctttctagcccaggctagtcctcttgtgtctaccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gccagagcagggcagtgtgttttctttctagcccaggctagtcctcttgtgtctaccacc 368
Query: 121 ccagtgctgtgtttatgggtagtggaattttataatctagatttttgcccccagctgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ccagtgctgtgtttatgggtagtggaattttataatctagatttttgcccccagctgtgt 308
Query: 181 gacattgatgagtctcttgttttcccagttttattagataattctcagacgcctttcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gacattgatgagtctcttgttttcccagttttattagataattctcagacgcctttcaga 248
Query: 241 tgttcacattttggtgtttaaaatcatatttatctatctagttattttgtgtgtgtacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgttcacattttggtgtttaaaatcatatttatctatctagttattttgtgtgtgtacag 188
Query: 301 catatatagcctacatgtagaggacaacggacaattggcaggagtctgttttctctttcc 360
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 187 catatataacctacatgtagaggacaacagacaattggcaggagtctgttttctctttcc 128
Query: 361 accgtgtaggtcccagggatggaactcaggttgtgaaacttaacagcaggcatttttacc 420
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 127 accatgtaggtcccagggatggaactcaggttgtgaaacttaacagcaggcattcttacc 68
Query: 421 cactgagccatctcaccaaccctcanattttgaatatatacacacaaactcagacttact 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 67 cactgagccatctcaccaaccctcaaattttgaatatatacacacaaactcagacttact 8
Query: 481 agaatgg 487
|||||||
Sbjct: 7 agaatgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
