CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGTGGTTTTCTATATAACAAATGGGATTTTAGCTGAGTGTTATTC
AGAGTTAATCCCACCTAGAAATTTGGAGATTTATCTCAGCTCCTGTCATT
TTGCTCAGGGAAAAATGTACTGTATTTTTTAACTAAAGTCTATGCCTGGG
TTTATCCCATCCTGCCCTCCTCCACTTCCTTCTTCATTTTCCTCTTATGA
ACATAGATATTTTTCATATAGTATATCCTGATTACAGTTTCCCCTCCCTA
TTTTCTTCCCAATTCGTCCTTGTCTCTCCTCCCATTTGGATCCATCCCTC
TTGTCTCTCATTAGAAAAGAAATAGGCTAGAGAATAGTGATATGTTATGA
GATGAGATGAGATGAGATGAGATGAGATGACATGACATGACATGACATGA
CATGACAATTGGACAAAAACATGCCAACAGAAGAAAAAGAGCTCAAGAGA
AGGCATAAGAATTAAACTCACTCATTCACATGCTCAGGAATCCCATAAAA
ACTTTAAACTAGAAGGTATAAAATACACAAAGAGGACCTAGTACAGATGC
ATGAAGGCTTTATACATGCTTCCTCAAGCTCTGGAAGTTCATATGAGCTG
CGATCATACTGATTTCGGGGGCCTTGTTGTTTTTGTGCCCTCACACTATC
TGGGGCTTACATTACAGAAGGGGCATTCACTAAGCCTTGAA

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGAGCACCATTTTTAATGG
GGTTATTTGATTTTCTGGAGTCCACCTTCTTGAGCTCTTTATATATATTG
GATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATC
TGTTGGTGGTCTTTTTGTCTTATTGATGGTGTCTTTTGCCTTGCAGAAGC
TTTGCAATTTTATGAGGTCCCATTTATCCATTCTTGATCTTACAGCACAA
GTCACTGTCTTTTTAATAAATGATGAAATTAGAAGAGTCCTGATAGTGAG
AGGGATATTAACCCAGATCTTCACACTACTGACTTAAGAAAAAGACAAAC
ATTACTTGTGTGTGTGTGTGGGGTGTATGTATGAGTGCACGTGGAAGTGT
ATGTGAGTGTCCACAGGAGCACATGCACATATTTGTTTATATGGTGTCCA
TGTGGTGGCCTGGCTTTACACTGGAAGTCTTGATTGCTCTCCATATTATT
CTTTGAAGCAGGGTCTCTCTGTTGAACCCAGAATTCCCTGAAGAAGCTTG
TATAGCTAGCTGGTTTGATCCCGGGAATCCCCCTCTCCCTCTTTGGCTGG
CATTATTTGCTCCACTTTGCCAACTATGATTATATTAGTAATTTGATGAC
CCTAACCCGGTGCTGGTCGGGCCCTTCCCCCTCCTTG

Query= MSMg01no368_m16.b1 MSMg01no368_m16.b1 CHROMAT_FILE:
MSMg01no368_m16.b1 PHD_FILE: MSMg01no368_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:20 2005
         (631 letters)



>mm_chr3_29489315_29490346
          Length = 1032

 Score = 1112 bits (575), Expect = 0.0
 Identities = 621/649 (95%), Gaps = 21/649 (3%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagtggttttctatataacaaatgggatt-ttagctgagtgttattcagagtta 62
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 204 ggaattcagtggttttctatataacaaatgggattcttagctgagtgttattcagagtta 263

                                                                       
Query: 63  atcccacctagaaatttggagatttatctcagctcctgtcattttgctcagggaaaaatg 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atcccacctagaaatttggagatttatctcagctcctgtcattttgctcagggaaaaatg 323

                                                                       
Query: 123 tactgtattttttaactaaagtctatgcctgggtttatcccatcctgccctcctccactt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tactgtattttttaactaaagtctatgcctgggtttatcccatcctgccctcctccactt 383

                                                                       
Query: 183 ccttcttcattttcctcttatgaacatagatatttttcatatagtatatcctgattacag 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccttcttcattttcctcttatgaacatagatatttttcatatagtatatcctgattacag 443

                                                                       
Query: 243 tttcccctccctattttcttcccaattcgtccttgtctctcctcccatttggatccatcc 302
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttcctctccctattttcttcccaattcgtccttgtctctcctcccatttggatccatcc 503

                                                                       
Query: 303 ctcttgtctctcattagaaaagaaataggctagagaatagtgatatgttatgagatgaga 362
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttcttgtctctcattagaaaagaaataggctagagaatagtgatatgttatgagatgaga 563

                                                                       
Query: 363 tgagatgagatgagatgagatgacatgacatgacatga--------------------ca 402
           ||||||||||||||||||||||| |||| |||| ||||                    ||
Sbjct: 564 tgagatgagatgagatgagatgagatgagatgagatgagatgagatgagatgagatgaca 623

                                                                       
Query: 403 tgacatgacaattggacaaaaacatgccaacagaagaaaaagagctcaagagaaggcata 462
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgacatgacaattggacaaaaacatgccaacagaagaaaaagagctcaagagaaggcata 683

                                                                       
Query: 463 agaattaaactcactcattcacatgctcaggaatcccataaaaactttaaactagaaggt 522
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agaattaaactcactcattcacatgctcaggaatcccataaaaactttaaactagaaggt 743

                                                                       
Query: 523 ataaaatacacaaagaggacctagtacagatgcatgaaggctttatacatgcttcctcaa 582
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 744 ataaaatacacaaagaggacctaatacagatgcatgaaggctttatacatgcttcctcaa 803

                                                            
Query: 583 gctctggaagttcatatgagctgcgatcatactgatttcgggggccttg 631
           ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 804 gctctggaagttcatatgagctgcgatcatactgatttcggggtccttg 852


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1032
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1022
Effective search space:   634662
Effective search space used:   634662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)