Query= MSMg01no370_f02.b1 MSMg01no370_f02.b1 CHROMAT_FILE:
MSMg01no370_f02.b1 PHD_FILE: MSMg01no370_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:20 2005
(378 letters)
>mm_chr3_104760427_104761207
Length = 781
Score = 694 bits (359), Expect = 0.0
Identities = 372/377 (98%), Gaps = 3/377 (0%)
Strand = Plus / Minus
Query: 4 ggaattctatacagaccaggctggcttcaaattcagagatctgcctgtttctgccttctg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggaattctatacagaccaggctggcttcaaattcagagatctgcctgtttctgccttctg 500
Query: 64 aatgctgggatcatatatgaaccaccactgccagctatgtcttga-tttttttttttttc 122
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 499 aatgctgggatcatatatgaaccaccactgccagctatgtcttgattttttttttttttc 440
Query: 123 agaatgatctgagacctgtgtactatgcaaagaagagattt--gggggggggagctaaca 180
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 439 agaatgatctgagacctgtgtactatgcaaagaagagatttgggggggggggagctaaca 380
Query: 181 gtcttctctgcattttaagtcctgtttttgttgagttgaaacacttatactaatgagtag 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtcttctctgcattttaagtccagtttttgttgagttgaaacacttatactaatgagtag 320
Query: 241 acacaaaaggaatcagataggccaggtgtagtggctcatgtctttaatcccagtacttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 acacaaaaggaatcagataggccaggtgtagtggctcatgtctttaatcccagtacttgg 260
Query: 301 aaggcagaggcaggcaggtctctgtagagagttggaggccagcctggtctacaaagtgag 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaggcagaggcaggcaggactctgtagagagttggaggccagcctggtctacaaagtgag 200
Query: 361 tacagaacccacgttgg 377
|||||||||||||||||
Sbjct: 199 tacagaacccacgttgg 183
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 781
Length adjustment: 9
Effective length of query: 369
Effective length of database: 772
Effective search space: 284868
Effective search space used: 284868
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_f02.g1 MSMg01no370_f02.g1 CHROMAT_FILE:
MSMg01no370_f02.g1 PHD_FILE: MSMg01no370_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:20 2005
(267 letters)
>mm_chr3_104586711_104587377
Length = 667
Score = 495 bits (256), Expect = e-144
Identities = 264/267 (98%)
Strand = Plus / Plus
Query: 1 tccactcagaccgagaaagccaggtccagactctttctgtctctgggcagggccatcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccactcagaccgagaaagccaggtccagactctttctgtctctgggcagggccatcatt 260
Query: 61 gtccgaaatggggagatcattccgatgtcccgggagttcacaccagagacggagcgccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtccgaaatggggagatcattccgatgtcccgggagttcacaccagagacggagcgccag 320
Query: 121 cgtcttcagctgcttgtaagcaggggctaaaatccctatccctggtctttcctctcaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtcttcagctgcttgtaagcaggggctaaaatccctatccctggtctttcctctcaagc 380
Query: 181 ctttcaaagcttcccactgggaacttcctgggaaggtgctgtgtggacgactgtggggtg 240
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 381 ctttcaaagcttcccactgggaacttcctgggaaggtgctgcgtggacgtctgtggggtg 440
Query: 241 ttgggtgagctgaaggngtaatgcagc 267
|||||||||||||||| ||||||||||
Sbjct: 441 ttgggtgagctgaaggggtaatgcagc 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space: 169764
Effective search space used: 169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
