Query= MSMg01no370_h02.b1 MSMg01no370_h02.b1 CHROMAT_FILE:
MSMg01no370_h02.b1 PHD_FILE: MSMg01no370_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:30 2005
(524 letters)
>mm_chr3_81082032_81082956
Length = 925
Score = 930 bits (481), Expect = 0.0
Identities = 511/521 (98%), Gaps = 1/521 (0%)
Strand = Plus / Plus
Query: 5 gaattcctctactcaaattcttttattttgatttataacttttctttataaagcagtact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctctactcaaattcttttattttgatttataacttttctttataaagcagtact 264
Query: 65 tttctatttgatttttccatccatccttaggttgcttggctcttcctctaacttcctctt 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 265 tttctatttgatttttccatccatccttaggttgcttggcttttcctctaacttcctctt 324
Query: 125 tcccctagtcctctgccctactccgcataagaac-tctctacccctactcttaaagcatc 183
|||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||
Sbjct: 325 tcccctagtcctctgccctattccgcataagaacatttctaccccaactcttaaagcatc 384
Query: 184 taagctttaccctccccactcctcacagtgctcctttacctctcatgggtcctttctcat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taagctttaccctccccactcctcacagtgctcctttacctctcatgggtcctttctcat 444
Query: 244 tttcttgtctctacagctacttctcttacctttaacacataaatctaatttcagtgttag 303
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 tttcttgtctctacagctacttctcttgcctttaacacataaatctaatttcagtgttag 504
Query: 304 aatttgcatatgaaagaaagcatgcatatagcatttgtccttctgggctacttggtgaat 363
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatttgcatatgaaagaaagcgtgcatatagcatttgtccttctgggctacttggtgaat 564
Query: 364 ctaatattttaaaattcttctcaatttcctgtaagttcaatttttctttctattgtgtat 423
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 565 ctaatattttataattcttctcaatttcctgtaagttcaatttttctttccattgtgtat 624
Query: 424 atatagcacattgtattgtccagtcatttatccagacacaacaagactgatttcattttc 483
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 625 atatagcacattgtattgtccagtcatttatccagagacaacaagactgatttcattttc 684
Query: 484 tagctgttgtgaatagaacagcattgcttttggatgttcaa 524
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tagctgttgtgaatagaacagcattgcttttggatgttcaa 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 925
Length adjustment: 10
Effective length of query: 514
Effective length of database: 915
Effective search space: 470310
Effective search space used: 470310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_h02.g1 MSMg01no370_h02.g1 CHROMAT_FILE:
MSMg01no370_h02.g1 PHD_FILE: MSMg01no370_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:30 2005
(236 letters)
>mm_chr17_20870237_20870872
Length = 636
Score = 426 bits (220), Expect = e-124
Identities = 232/236 (98%)
Strand = Plus / Minus
Query: 1 cagtgagtttttcttttaatttcctatcacaaaacagaagcgttgcttaaatgtgatgca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 338 cagtgagtttttcttttaatttcctatcacaaaacagaagggttgcttaaatgtgatgca 279
Query: 61 ttagaagtagtgaattttatagaataaacatggagacacagagttatatcatgaatctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 278 ttagaagtagtgaattttatagaataaacatggagacacagagttatatcatgaaactag 219
Query: 121 caacagtttcatgatatagttgtggatagcactgggggtaattatatttggtgttaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 caacagtttcatgatatagttgtggatagcactgggggtaattatatttggtgttaattc 159
Query: 181 catcctcctgtgagggactataaacaaggaatgagtcagcactcaggttatttcct 236
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 158 catccttctgtgaggggctataaacaaggaatgagtcagcactcaggttatttcct 103
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
