TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTGAAGGCCACAAGAACTTAGAACTGAGA
ACCGTGGCTCCTGTTATTTGTTGAGATTTGTTTTCTCTGTGGATGGCAAT
TCTCCTGGCTCTTTATTAGCAGAGTGTCCTCTAGCTTTATGAACAATTGT
GATTTAAACTCACATAAACTCACCTAAGTATTTCATATATATAACCTCTC
AGAAAAATTTTGACAGTGATGCTAAGACAAAATTTATGAGATAAATGCAA
TAAAGTTAGTACTTCTTATGGTAGAGGTAGCTTTTAGAATTGAATACTAA
AAGAAAATATTCTAGTAAGGTTAGAAAAATATTTACACTTGCAATTTAAA
TGAAAATTTAATCAACAGACATGAAATTTTGTTAATGCTATTTATTAAAT
TTTTAAACATTCTGCATTTTCTATTGTTAATGATATAAAAATCTTAAGAA
GCATAAACATTCTTTTTTTAAACATTTTTTATTACGTATTTTCCTCAATT
ACATTTAGAATGCTATCCCAAAAGTCCCCCATACCCTCCCCCCCACTTCC
CTACCCACCCATTCCCATTTTTTTTGGCCCTGGCGTTCCCCTGTACTGGG
GCATATAAAGTTTCTGTGTCCAGAAAGCCTCTCTTTCCCAGGATGGGCGA
CTAGGCCACTTTTTGATACTATGGACCTAAATCCAGGCTTTCTGGGAACG
GTTAATCCCAAAGGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
ACGCAGTTGAATCCTTCTCAACAGTCTGTGTTGTGGGAACACTTCATTAC
CACCGTTCCCCAGCTGAAGAGTTCTGAATTCACGCAGTTGAATCCTTCTC
AACAGTCTGTTTTACGGGAACACTTTATTACCATGACCCGCAGTTCTGGT
TCCGGAATGAGGGATCTTCCTTGTGCCGGTGATGGTAACCGTCCCGTCCC
GGGTTTTCTCTTCCCGGGATTTCTCGTCCCAGGTCTTCTCGTCCCGTCCC
GGGTTTTCTTGTCCCGGGTTTTTTCGTCCCGGATTCTTTCTTCCCGGATT
TCGGCACCAACTCTTACACGCGTTCTCGCGACCAGCCAGGAAAGACGCAA
CAAACCGGAATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTTCAGGAG
CCAGAGAGCAAGAGCCAGAGCCAGAGAGCAAAAGGGCGAAACCCCGTCCC
CTTTAAGGAGAATTATTCTCCGCCTAGGACGTATTACTCCCTGATTGGCT
GCAGCCCATCGGCCCAGTTATCATCACGGGAAAGGCAGAACACATGGCGG
GAAAACTGCCCCTGCACGTGTACAGATTATGTTTACTACTTAAAACACAG
CTGTCAGCGCCATCTTGTAATGGCAAATGTGAGGGCGGCTTCCTACACTC
AGAAGTTTGCTCTGGGGAATTTATTAGTTATAAGGTTATAAAAAAGGTTA
ATTTAAAGAAGTGGCT

Query= MSMg01no371_a06.b1 MSMg01no371_a06.b1 CHROMAT_FILE:
MSMg01no371_a06.b1 PHD_FILE: MSMg01no371_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:15 2005
         (553 letters)



>mm_chr3_60677235_60678187
          Length = 953

 Score = 1062 bits (549), Expect = 0.0
 Identities = 552/553 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgaaggccacaagaacttagaactgagaaccgtggctcctgttatttgttgagatttgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgaaggccacaagaacttagaactgagaaccgtggctcctgttatttgttgagatttgt 260

                                                                       
Query: 61  tttctctgtggatggcaattctcctggctctttattagcagagtgtcctctagctttatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttctctgtggatggcaattctcctggctctttattagcagagtgtcctctagctttatg 320

                                                                       
Query: 121 aacaattgtgatttaaactcacataaactcacctaagtatttcatatatataacctctca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaattgtgatttaaactcacataaactcacctaagtatttcatatatataacctctca 380

                                                                       
Query: 181 gaaaaattttgacagtgatgctaagacaaaatttatgagataaatgcaataaagttagta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaaattttgacagtgatgctaagacaaaatttatgagataaatgcaataaagttagta 440

                                                                       
Query: 241 cttcttatggtagaggtagcttttagaattgaatactaaaagaaaatattctagtaaggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttcttatggtagaggtagcttttagaattgaatactaaaagaaaatattctagtaaggt 500

                                                                       
Query: 301 tagaaaaatatttacacttgcaatttaaatgaaaatttaatcaacagacatgaaattttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 501 tagaaaaatatttacacttgcaatttaaatgaaaatttaatcaacagacatgaaatttta 560

                                                                       
Query: 361 ttaatgctatttattaaatttttaaacattctgcattttctattgttaatgatataaaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaatgctatttattaaatttttaaacattctgcattttctattgttaatgatataaaaa 620

                                                                       
Query: 421 tcttaagaagcataaacattctttttttaaacattttttattacgtattttcctcaatta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcttaagaagcataaacattctttttttaaacattttttattacgtattttcctcaatta 680

                                                                       
Query: 481 catttagaatgctatcccaaaagtcccccataccctcccccccacttccctacccaccca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catttagaatgctatcccaaaagtcccccataccctcccccccacttccctacccaccca 740

                        
Query: 541 ttcccattttttt 553
           |||||||||||||
Sbjct: 741 ttcccattttttt 753


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space:   512049
Effective search space used:   512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)