AAAAAGCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGTTTAATTCGGAAC
CCCATTTTAAATGGAATTATTTGGATTGTTGATGTCCAGTTTCTTACAGA
AACTCCAGTCCCATTTATTTTTTTATCAGTACTTGCACTATTGGTGTTCT
GATCAGGAAGCTGTCTCCTGTGCCAATGTGTTCAAGGCTATTCCCCACTT
TTTCTTTTATCAAGTATCAGTGTATCTGGTTCTATGTTGAATCAGATTCA
GTGTATCTTGTTTTATTTTGAGGTCTTTGCTCCACTTGGACTTGTGCAGG
GTGATAGATATGGATCTATTTGCATTCTTCTGCATGCAGACATCCAATTA
GACCAGCAGCATTTGTTGAAGATGCTTTTTTTCCCCATTGTGTAATTCTT
TATTTTAAACAAGGTGACTGGATGTACACCTAGGTCTTTGGCTCCAAATT
CCATTGGTCAACCTGTCTATGTTTATGCCAATACTATGTAGTTTTTATTA
TTATAGCTCTGTAATACAGCTTGAATTTGAGGGTGGTGATCCCTCTGAAA
GTTCTTTTGTTGCATACGATACGTTTAAACACCATGAATTTTTTTGTTTG
TCCCATGAACTTGAATTATTTATTCTGCAATGAATTGCGCCAACCTTTGA
TGGCACTTGCCTTCGATCCTAAN

NNCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCC
GCGGAATTCTCTGTAAGTTCACTGAGACCTGACTTTCTTGCTTAGCAATG
GGCAACCTGAGGATGGGTCCATAGTTCTCTACAGAATGCTAGCAAGATAA
GTTCATTCTCACCAGTGTCTTTGTGTGTGTATTCTTTAAGAACCATTTGT
CCGTGTTCCTCTTAATGATATAGCAGCTCTGGGCTGCCCATAATCTTTAG
TCACAGCACTGAGCCATGGTGGATATAATACTGATAATTCTAATGTGACA
CAGAGATCCATCCTATTCCTAATTCTCTATTACACTGTTTCCTGAACATG
CCATATCATACCAATGATAGAAATGCAAAAAATATATTTTGTCTAATAAA
GTTGAAAATAGATAAATTGAATGCATTCAAACCAACTGTCTATGCATTTG
GGCTACTTTAACCGAGATGATTCGGGGTACTTAGTTGAAGAACTGTAGTC
ATTTCCAAAGATAGCTAGCTATTAAAAGGGAGTAGATGGTACAATGCTGT
AATGATCCAATACTTTTTCATGAGGCTCCAATAAAATTAAGCCCCAGTAT
TTTCACTTTGCTGCATAAATGGACACTAAATCTAATGGCTTTATTTAAAA
ACAGTTGTATTTCTTGATATTAATTTTGTAAATATTGTATCAGNTATTCC
TCTTGTCATTGGGACAATAA

Query= MSMg01no371_i03.g1 MSMg01no371_i03.g1 CHROMAT_FILE:
MSMg01no371_i03.g1 PHD_FILE: MSMg01no371_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:58 2005
         (569 letters)



>mm_chr3_30556380_30557348
          Length = 969

 Score = 1077 bits (557), Expect = 0.0
 Identities = 566/569 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctgactttcttgcttagcaatgggcaacctgaggatgggtccatagttctctacagaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgactttcttgcttagcaatgggcaacctgaggatgggtccatagttctctacagaat 260

                                                                       
Query: 61  gctagcaagataagttcattctcaccagtgtctttgtgtgtgtattctttaagaaccatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctagcaagataagttcattctcaccagtgtctttgtgtgtgtattctttaagaaccatt 320

                                                                       
Query: 121 tgtccgtgttcctcttaatgatatagcagctctgggctgcccataatctttagtcacagc 180
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 321 tgtccgtgttcctcttaatgatatagcagctctgggctgcccataacctttagtcatagc 380

                                                                       
Query: 181 actgagccatggtggatataatactgataattctaatgtgacacagagatccatcctatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgagccatggtggatataatactgataattctaatgtgacacagagatccatcctatt 440

                                                                       
Query: 241 cctaattctctattacactgtttcctgaacatgccatatcataccaatgatagaaatgca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctaattctctattacactgtttcctgaacatgccatatcataccaatgatagaaatgca 500

                                                                       
Query: 301 aaaaatatattttgtctaataaagttgaaaatagataaattgaatgcattcaaaccaact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaaatatattttgtctaataaagttgaaaatagataaattgaatgcattcaaaccaact 560

                                                                       
Query: 361 gtctatgcatttgggctactttaaccgagatgattcggggtacttagttgaagaactgta 420
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 gtctatgcatttgggctactttaaccgagatgattcagggtacttagttgaagaactgta 620

                                                                       
Query: 421 gtcatttccaaagatagctagctattaaaagggagtagatggtacaatgctgtaatgatc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtcatttccaaagatagctagctattaaaagggagtagatggtacaatgctgtaatgatc 680

                                                                       
Query: 481 caatactttttcatgaggctccaataaaattaagccccagtattttcactttgctgcata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caatactttttcatgaggctccaataaaattaagccccagtattttcactttgctgcata 740

                                        
Query: 541 aatggacactaaatctaatggctttattt 569
           |||||||||||||||||||||||||||||
Sbjct: 741 aatggacactaaatctaatggctttattt 769


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space:   536081
Effective search space used:   536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)