Query= MSMg01no371_i17.b1 MSMg01no371_i17.b1 CHROMAT_FILE:
MSMg01no371_i17.b1 PHD_FILE: MSMg01no371_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:01 2005
(324 letters)
>mm_chr3_122205692_122206415
Length = 724
Score = 528 bits (273), Expect = e-154
Identities = 312/325 (96%), Gaps = 2/325 (0%)
Strand = Plus / Plus
Query: 1 taggctagcctgggttatagtgagagaccctgtctcactgagcaaactgaatgattgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 taggctagcctgggttatagtgagagaccctgtctcactgagcaaacggaatgattgaaa 260
Query: 61 ccccctttgtctgtctgtcctgaggtcctgagagcagaggaggagggtagggagaggaga 120
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 ccgcctttgtctgtctgtcctgaggtcctgagaacagaggaggagggtagggagaggaga 320
Query: 121 ggaagaagtgaaggtccaccctgaaatccgcctacaccacctcagccggcacagggaaga 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 321 ggaagaagtgaaggtccaccctgaaatctgcctacaccacctcagccggcactgggaaga 380
Query: 181 gaggcgtgcacagcgcacagtccatccccagtctgggatttgctttgcttggggggcggg 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggcgtgcacagtgcacagtccatccccagtctgggatttgctttgcttggggggcggg 440
Query: 241 ggggagacttgtttatctttctctccttgctaaga-agtgtgtgaggagtaattccgggg 299
||||||||||| ||||||||||||||||||| | ||||||||||||||||||| ||||
Sbjct: 441 ggggagacttggggatctttctctccttgctaa-acagtgtgtgaggagtaattctgggg 499
Query: 300 cttttcgaggcatctggagggcaca 324
||| |||||||||||||||||||||
Sbjct: 500 cttatcgaggcatctggagggcaca 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_i17.g1 MSMg01no371_i17.g1 CHROMAT_FILE:
MSMg01no371_i17.g1 PHD_FILE: MSMg01no371_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:01 2005
(494 letters)
>mm_chr3_122352188_122353081
Length = 894
Score = 820 bits (424), Expect = 0.0
Identities = 469/488 (96%), Gaps = 9/488 (1%)
Strand = Plus / Minus
Query: 11 gctgtgtgcactggtgaactacgaaggagaaaccctggtttcaaacatagtgaggggtaa 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 gctgtgtgcactggtgaactacgaaggagaaaccctggtttcaaacatagtgaggggtaa 835
Query: 71 gacccaaccccccaaggttggcctatgagcgccacacttgtgctgtggcaaatgcatacc 130
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 834 gacccaa-cccccgaggttggcctatgagcgccacacttgtgctgtggcaaatgcataac 776
Query: 131 tgcactcatatgtgtgaatgaccacagacatgcatacaagcgcatgcgc----gcgcacg 186
|||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||
Sbjct: 775 tgcactcatatgtgtgaaggaccacagacatgcatacaagagcatgcgcacgagcgcacg 716
Query: 187 cgcacacacacacacacacacacactttttagtaaagacccttatgaatttcataggaaa 246
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tg----cacacacacacacacacactttttagtaaagacccttatgaatttcataggaaa 660
Query: 247 taaagctattaaaaataggatgtgccatgtttacaaacaggctgacatacacaaaggact 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 taaagctattaaaaataggatgtgccatgtttacaaacaggctgacatacacaaaggact 600
Query: 307 ttgcatcaaagttaaagatatttgtatgatgttaaagtcatagccagcaccatgcttctc 366
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 599 ttgcatcaaaattaaagatatttgtatgatgttaaagtcataaccagcaccatgcttctc 540
Query: 367 tgttttaattttaaagaaagaaaaggcagtaatttagaataagagccaattagctggtgg 426
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 539 tgttttaattttaaagaaagaaaaggtagtaatttagattaagagccaattagctggtgg 480
Query: 427 ctggagaagattcagtgttcgcatgaacttctgatagaactggacattgggaggaaagct 486
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 479 ctggagaagattcagtgttcgcatgaacttctgatagagctggacattgggaggaaagct 420
Query: 487 ggaggtat 494
||||||||
Sbjct: 419 ggaggtat 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
