CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATTTATTCTTGTTTATTTAGTCCTAT
AATGCTCTCATAGAAGGTTTAAGCAAAAGAAGTTTCACCATTGAACAGAA
CACATTTGATTAAAATCTAATAGTGTTTTTTCTCAGTATGTCTGTCATTT
ACATCCAGTGGAATGGGGGGAGGGCTTGTCATTCTCCCTCTTGTGAAATT
ACAGACATAAAGAAGACAGACCATTTGCAACTCTGGATAATAGATTTTAT
ACTCCTTTTTTTCTCCAAAGGCACAAATGTGTCGCTGGTAACCAATCTTG
TCCTAAGGTTTACAGGCAAATAGATGGAACTAGAAAATACCATCTTGAGT
GAGGTAACTCAGACCCAAGAGAGATGCATGGTATGCACGCGCTAATAAGT
GGAGATTAGCGAGAACGAACAAAGAACCAAGAACAACAGGAACAGAATAC
CCAAGAGACAGTCCATACAACTCAGAGAGGTCTACAAGCTGAAGTGCCCA
AGTGAGGACTTGGAAGAGAGAAGAAATCTTTGGTTTGGTTTTTTAATTAT
TTGGTTTCTTCTTGATCCGATCCGCCTTCTTCTCATGGGTTGGTAAATTC
CGTTCCCTTACCAAATTGTTATCGGATAAATGCTCTGAATATTTTTGCCC
TATTATAGGCCTCTCTCTGGGTGGCCTTTTGTTTCTTCTATGATCCCTCC
C

TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAAAGACCATGGTAAGCTCAAGGACCGCCTAGGACTGGTGAGGAATC
TAACTTAGCTATATGTAAAAGACCAATCCTTAGAGGTACTTATAATAAAG
CAGTATTAAGGGAAATAACACAGATTCATTTACCAACTAAAGCAAGGACA
TTGGAGTATTCGTTATACAGGATGCCATGGTTCCAGGAGACTACATTTCC
ATGAACTTTTCACCTCGGCACAGCATCCAGGCTTTTTGGCCTGTCAGGCA
GGTCAATACTGGAGTGGATGTAGAAGATTCTCTGATTGAAGAAGACATAG
TAAATACTCAAAAAACACCTCTTTAATTCACTTTCTAGATTTTATATTGA
TCAAAATTACAAATTGCAATTTATGTGCTACAATTTGGTTCTGCTGTTTT
CTTTTCTATATTTAAAACAAATACATAGAAATTTTTCATAAAGGAAAAAT
ATATTTTCCATCATAAAATCCTGCAACTTTTAACAAATTGTGTTATAGGA
TCAGGATGAAACATAAGGATATATGGATGATTAGTGATCATTTTGGTTGG
ACTTCATTAATTATCCTAATTAAATATATACTACCTTTCGTCACTTTAGA
CTTCACCAATCACTTTGAAGCTAACCCCTACATTCTAAATACGATCCTTA
AATTCCAATCCGTGGTTATAAAACGTCGTTTTATAATGGAAAAGGAAGGG
ATCTAT

Query= MSMg01no371_n02.b1 MSMg01no371_n02.b1 CHROMAT_FILE:
MSMg01no371_n02.b1 PHD_FILE: MSMg01no371_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:24 2005
         (285 letters)



>mm_chr3_111902821_111903505
          Length = 685

 Score =  540 bits (279), Expect = e-158
 Identities = 282/283 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttattcttgtttatttagtcctataatgctctcatagaaggtttaagcaaaagaagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttattcttgtttatttagtcctataatgctctcatagaaggtttaagcaaaagaagtt 260

                                                                       
Query: 61  tcaccattgaacagaacacatttgattaaaatctaatagtgttttttctcagtatgtctg 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaccattgaacagaacgcatttgattaaaatctaatagtgttttttctcagtatgtctg 320

                                                                       
Query: 121 tcatttacatccagtggaatggggggagggcttgtcattctccctcttgtgaaattacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatttacatccagtggaatggggggagggcttgtcattctccctcttgtgaaattacag 380

                                                                       
Query: 181 acataaagaagacagaccatttgcaactctggataatagattttatactcctttttttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acataaagaagacagaccatttgcaactctggataatagattttatactcctttttttct 440

                                                      
Query: 241 ccaaaggcacaaatgtgtcgctggtaaccaatcttgtcctaag 283
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaaaggcacaaatgtgtcgctggtaaccaatcttgtcctaag 483


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space:   186576
Effective search space used:   186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no371_n02.g1 MSMg01no371_n02.g1 CHROMAT_FILE:
MSMg01no371_n02.g1 PHD_FILE: MSMg01no371_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:24 2005
         (545 letters)



>mm_chr3_112044803_112045747
          Length = 945

 Score =  862 bits (446), Expect = 0.0
 Identities = 461/466 (98%)
 Strand = Plus / Minus

                                                                       
Query: 80  caatccttagaggtacttataataaagcagtattaagggaaataacacagattcatttac 139
           |||| |||||||||||||||||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 945 caattcttagaggtacttataataaagcaatattaagggaaagaacacagattcgtttac 886

                                                                       
Query: 140 caactaaagcaaggacattggagtattcgttatacaggatgccatggttccaggagacta 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 caactaaagcaaggacattggagtattcgttatacaggatgccatggttccaggagacta 826

                                                                       
Query: 200 catttccatgaacttttcacctcggcacagcatccaggctttttggcctgtcaggcaggt 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 catttccatgaacttttcacctcggcacagcatccaggctttttggcctgtcaggcaggt 766

                                                                       
Query: 260 caatactggagtggatgtagaagattctctgattgaagaagacatagtaaatactcaaaa 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 caatactggagtggatgtagaagattctctgattgaagaagacatagtaaatactcaaaa 706

                                                                       
Query: 320 aacacctctttaattcactttctagattttatattgatcaaaattacaaattgcaattta 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aacacctctttaattcactttctagattttatattgatcaaaattacaaattgcaattta 646

                                                                       
Query: 380 tgtgctacaatttggttctgctgttttcttttctatatttaaaacaaatacatagaaatt 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tgtgctacaatttggttctgctgttttcttttctatatttaaaacaaatacatagaaatt 586

                                                                       
Query: 440 tttcataaaggaaaaatatattttccatcataaaatcctgcaacttttaacaaattgtgt 499
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 585 tttcataaaggaaaaatatattttccatcgtaaaatcctgcaacttttaacaaattgtgt 526

                                                         
Query: 500 tataggatcaggatgaaacataaggatatatggatgattagtgatc 545
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tataggatcaggatgaaacataaggatatatggatgattagtgatc 480


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)