CCTCCTATATTCAGAGGATCCGCGGAATTCAATTCCTGTGACTAAATTTA
TAAAAGGAGAAAAATTAATCTCCAGTAATGGTTTCCTGGTCTCCATTGCA
TGCCATGCGTGTCTGCATGCTCACTCTCTCTGTCTCTGTCTCTGTCTCTC
TGTCTTTCTGTCTTTCTCTCTTTCATACACATACCCACAAAATAAACAAA
ATAAATAAAAGATAAAATGATTCCACACAGAACTAGAAGAAAAATCTGAA
GATTTTGCATGATGTCAGAGAGTGGAACTTATCTTTATTTTCAAATGCAA
CATTCTGAAGTTCATTCTTTCCATTAGGAAACAGAAAACATCAGAATATT
CGTAAGACTTTACTAATTCAGATTAGCATTTGCCCAGCAGGTATGGGAAC
TACAGTTCCTTAATTCGTGTATTTTAATAGCAATGAAAACTTTCAACCCC
TTTTGCAAATATGATTAACTCAAAAACTGTCTCATATTGTCTCAAGCAGC
CTACAAATTCCTTTGGCTTTTTCAAAGATATATCACGCCATCATTCAAGA
ATTTCAATTATGCCAGGAAAGATAAACTGTGATAATTGTTTAACACTGTA
TGCCGAAGAAATTGAAACCACTGATGAACTTAAAATGAGAATAACCCTCG
AACTTAATTATAATTCCTTTTATTTAAAACCCCAGATAAATTTGCCAACA
AAAGGGACTATTGAAAATTTATTTTTAAAAAAAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXCAGAAAGTCTTTAATTTTTTTTTTATTTCTTCCTGTACCCAGT
GATCATTAAGTAGAGAGTTGTTCAGTTTCTATTAATATTTAGGTTTTATG
ATGGTTCTGTTCTTGTTGAAGTTCCATAAGAATGAAAAGGATTATTTCTT
TGATTGGTGCTGAGAAGAAATTATATTGTTTTGTGTTTGGGTAACATGTT
CTATACATATACATTATGTCCGTTTGAGTTATAACCTCTGCAAGTTTCAT
TATTTCTTTGTTTAGTTTCTGTCTTAATGTCTTGTACTTTGGTGATAGTA
GGGTGTAGAAGTCTCCTACTATTAACATGTGGGGCTTGATGTGAGATTTC
CCCCCCACTAATGTTTTTTTACTAATATATGACTGCTGGCTCTCTTATTT
TTGACACCCTTATCCTTCTAAACTGACACATCTTCTTTACGATACCTTCC
CTCTGTAGTGCATAGCGGTGCCTTATCCATCTCCCTAAGAGAATTATTCC
AGCACATTCTGCACCTAATCGCATCCCTCTTTGTCTTTTTTTTCTACCTT
TATTTACCGCTTACTTCTTCTGAAATTTCCCTCTCTACCTTCTTCGTGTT
ACCTACTCTCTTCTTTTTTATTCTCATCCATAACTTGTATTAATATCTTC
CTTCTTGTCGACTCTCTATGTATATTTTTTCG

Query= MSMg01no373_b23.b1 MSMg01no373_b23.b1 CHROMAT_FILE:
MSMg01no373_b23.b1 PHD_FILE: MSMg01no373_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:01 2005
         (483 letters)



>mm_chr3_44360450_44361332
          Length = 883

 Score =  890 bits (460), Expect = 0.0
 Identities = 471/478 (98%), Gaps = 6/478 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattcaattcctgtgactaaatttataaaaggagaaaaattaatctccagtaatggttt 65
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 802 gaattcaattcctgtgactaaatttataaaaggagaaaaatcaatctccagtaatggttt 743

                                                                       
Query: 66  cctggtctccattgcatgccatgcgtgtctgcatgctcactctctctgtctctgtctctg 125
           ||||||||||||||||||||||||||||||||||||||||||      ||||||||||||
Sbjct: 742 cctggtctccattgcatgccatgcgtgtctgcatgctcactc------tctctgtctctg 689

                                                                       
Query: 126 tctctctgtctttctgtctttctctctttcatacacatacccacaaaataaacaaaataa 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tctctctgtctttctgtctttctctctttcatacacatacccacaaaataaacaaaataa 629

                                                                       
Query: 186 ataaaagataaaatgattccacacagaactagaagaaaaatctgaagattttgcatgatg 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ataaaagataaaatgattccacacagaactagaagaaaaatctgaagattttgcatgatg 569

                                                                       
Query: 246 tcagagagtggaacttatctttattttcaaatgcaacattctgaagttcattctttccat 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tcagagagtggaacttatctttattttcaaatgcaacattctgaagttcattctttccat 509

                                                                       
Query: 306 taggaaacagaaaacatcagaatattcgtaagactttactaattcagattagcatttgcc 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 taggaaacagaaaacatcagaatattcgtaagactttactaattcagattagcatttgcc 449

                                                                       
Query: 366 cagcaggtatgggaactacagttccttaattcgtgtattttaatagcaatgaaaactttc 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cagcaggtatgggaactacagttccttaattcgtgtattttaatagcaatgaaaactttc 389

                                                                     
Query: 426 aaccccttttgcaaatatgattaactcaaaaactgtctcatattgtctcaagcagcct 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaccccttttgcaaatatgattaactcaaaaactgtctcatattgtctcaagcagcct 331


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space:   412929
Effective search space used:   412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)