NTTTTCAGAGGATCCGCGGAATTCATTTATCTTTCCCATATGAATATGAT
GTCAAAAATTACCAGTTGACATTAGATAAACTATTAAGAGGACCATTTAT
AGAGAACAATAAATGCCCATGTTTGGATGAAATGAGATAATAATAAGATT
TAAAATGTCAAAGAATGAGGCTGGGCAGTCAGTAGAGTACAAAGCCCATG
TTAAATCGCCAGCCTATGGTGTTACATTCTTGAGTTTGTTAGGCAAGAAG
AAAAAGCGTTAGGGCCATCTTTCACTATGTAAGTGTTAGGAATTCAGTGT
TAAAAAGTCAGCTTAGGAAGCAGGAGCCACTATTTAAAAAAGAGAAAAGA
GAATCAAGAAATGTCAATACAACAGTTTGCTATACAGTTCCCCATAGACG
CATTTAAAGAATCCATGTCTTCAACATGAAGTATATATACTTTTATATAG
CTTACAGTGAACAAATTAAATTTAGATTTGTTATTAGAGTATATTTTTCC
AGTCTAGATTTGTTTTTCACAGTGTATAGATCTTATACACTTTTTAAAAC
TACCATAGATAATTCATATGTGCTAAGTGCATTCTATTTAGAAACATAGC
TCTGTTTTACTAATATTTTTATTAAGTTTCAACTGACTAGGAGTGTTTTC
AAACTTCCTGAAACAGAAAAAACATGTTAAAAATTTAATCATTTATCAAG
ATGTTTGAACA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTTAATTTAGTTCTATACTCCATTTTTTGATTGTTTGGGGTT
TTTTTTTTGGTGATAAATTTCTTGAGTAATATATATATTGCATATTAGCC
CTCTATTGGATGTGGGTTTAATGAAGATTTTTTCCCAATCTGAAGGTTGC
CAATTTGTCTTATCGACTATGTCCTTTACCTTACAGAACTTTCCAGTTCC
ATGAGGTCTCATTTATCGATTCTTGATCTTAGAGCATGAGCCATTGGAGT
TTTATTTAGTTCGTTTAGAGTACAGTTTAATTGTGTTATGACAAAAGGTT
TAGATTTTTTAAAAAATGAGAATAAATACAGTGACTATGAGCTAATTTTA
GTACCATTGAAGACAGTGTTTCATAATTTAAATTTTCCCCTGTGCAAATG
AGTTCAAGGCTCTTTCCCACCTTCTCTTCTATTAGATTCAGTGTATCTGG
TTTTATGTTGAGGTCCTTGATCTACTTGNACCTGAGCTTTGAACAAGGTG
ACCAAATATGGGTCTCTTTTCATTCTTCTACATACAGACAGCCAGGTACC
CCCGCACCACTTTTTGAAGATGCTTTCCTTTCTCCCATTGTATATTTTTT
GGCGTCCTTTGCCCAAAATCCAATCTGCCTTAACTGGGGTCTTTTATTTT
TACGCCTTTACTTCCACCCCCCTG

Query= MSMg01no373_l12.b1 MSMg01no373_l12.b1 CHROMAT_FILE:
MSMg01no373_l12.b1 PHD_FILE: MSMg01no373_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:44 2005
         (613 letters)



>mm_chr3_6783030_6784042
          Length = 1013

 Score = 1054 bits (545), Expect = 0.0
 Identities = 575/585 (98%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaattcatttatctttcccatatgaatatgatgtcaaaaattaccagttgacattagata 67
           ||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcatttagcgttgccatatgaatatgatgtcaaaaattaccagttgacattagata 267

                                                                       
Query: 68  aactattaagaggaccatttatagagaacaataaatgcccatgtttggatgaaatgagat 127
           ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 268 aactattgagaggaccatttatagagaacaatcaatgcccatgtttggatgaaatgagat 327

                                                                       
Query: 128 aataataagatttaaaatgtcaaagaatgaggctgggcagtcagtagagtacaaagccca 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aataataagatttaaaatgtcaaagaatgaggctgggcagtcagtagagtacaaagccca 387

                                                                       
Query: 188 tgttaaatcgccagcctatggtgttacattcttgagtttgttaggcaagaagaaaaagcg 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 388 tgttaaatcgccagcctatggtgttacattcttgagtttgttaggcaagaagaaaaaacc 447

                                                                       
Query: 248 ttagggccatctttcactatgtaagtgttaggaattcagtgttaaaaagtcagcttagga 307
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 448 ttagggccatctttcactatgtaagtgttaggaagtcagtgttaaaaagtcagcttagga 507

                                                                       
Query: 308 agcaggagccactatttaaaaaagagaaaagagaatcaagaaatgtcaatacaacagttt 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 agcaggagccactatttaaaaaagagaaaagagaatcaagaaatgtcaatacaacagttt 567

                                                                       
Query: 368 gctatacagttccccatagacgcatttaaagaatccatgtcttcaacatgaagtatatat 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 568 gctatacagttccccatagacgcatttaaagaatccatgtcttcaacatgaaggatatat 627

                                                                       
Query: 428 acttttatatagcttacagtgaacaaattaaatttagatttgttattagagtatattttt 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 acttttatatagcttacagtgaacaaattaaatttagatttgttattagagtatattttt 687

                                                                       
Query: 488 ccagtctagatttgtttttcacagtgtatagatcttatacactttttaaaactaccatag 547
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 688 ccagtctagatttgtttttcacagtgtatagatcttatacactttttaaaactaccacag 747

                                                        
Query: 548 ataattcatatgtgctaagtgcattctatttagaaacatagctct 592
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ataattcatatgtgctaagtgcattctatttagaaacatagctct 792


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space:   604809
Effective search space used:   604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)