Query= MSMg01no373_l19.b1 MSMg01no373_l19.b1 CHROMAT_FILE:
MSMg01no373_l19.b1 PHD_FILE: MSMg01no373_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:45 2005
(465 letters)
>mm_chr3_126528918_126529782
Length = 865
Score = 886 bits (458), Expect = 0.0
Identities = 460/461 (99%)
Strand = Plus / Minus
Query: 5 ggaattcacttggctccccaacacttgaaggacagggagatggaatgacttgctaagcca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ggaattcacttggctccccaacacttgaaggacagggagatggaatgacttgctaagcca 606
Query: 65 cctggcaaatttggactgggccggaacatgagcatcaagggcctcaggtccccacttgct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cctggcaaatttggactgggccggaacatgagcatcaagggcctcaggtccccacttgct 546
Query: 125 attcaaattactaacctctgttccgttagagcccacagtgattgattcaatattttgaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 attcaaattactaacctctgttccgttagagcccacagtgattgattcaatattttgaaa 486
Query: 185 tcataaacctaaatgagccacctaaatgcctttgaactcaccctggcaaggtgactgggc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcataaacctaaatgagccacctaaatgcctttgaactcaccctggcaaggtgactgggc 426
Query: 245 caggtctgcaattaattactgcatcagtttcacacatctgggagccccatggctttattg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 caggtctgcaattaattactgcatcagtttcacacatctgggagccccatggctttattg 366
Query: 305 tctttttccatgctgccattaacaaaaatcacccttgggaacacttacattaggcaagta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tctttttccatgctgccattaacaaaaatcacccttgggaacacttacattaggcaagta 306
Query: 365 tacaaattaggatcattttcacgctgctggtagttttatagaanaggtgcctatctaccc 424
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 305 tacaaattaggatcattttcacgctgctggtagttttatagaaaaggtgcctatctaccc 246
Query: 425 agccatgcttagccctctctgagcaattaacagcttgtttc 465
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 agccatgcttagccctctctgagcaattaacagcttgtttc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_l19.g1 MSMg01no373_l19.g1 CHROMAT_FILE:
MSMg01no373_l19.g1 PHD_FILE: MSMg01no373_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:45 2005
(447 letters)
>mm_chr3_126389207_126390052
Length = 846
Score = 816 bits (422), Expect = 0.0
Identities = 438/444 (98%), Gaps = 3/444 (0%)
Strand = Plus / Plus
Query: 5 tgtagaccggctgggctggaatccatctcctcttgcccctcagttgtaggcttaaaggca 64
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgtaggccggctgggctggaatccatctcctcttgcccctcagttgtaggcttaaaggca 264
Query: 65 ctaccaccaaagattcaagtcttgagaacttacagcagttaaaagtgtcttgttttattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctaccaccaaagattcaagtcttgagaacttacagcagttaaaagtgtcttgttttattt 324
Query: 125 tatttttctctaaagggaaacattttaaatggacccacactgatactttatgaaacaaca 184
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatttttccctaaagggaaacattttaaatggacccacactgatactttatgaaacaaca 384
Query: 185 aattatttcagtgctttttaaaaatcatgtcttttttttttactgtaaaataatatgtgt 244
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 385 aattatttcagtgctttttaaaaatcatgt--tttttttttactgtaaaataatatgtgt 442
Query: 245 acttaagaatgattttggaaaaaa-tatgatggttaattaagaaaccagtggaaatagtc 303
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 443 acttaagaatgattttggaaaaaaatatgatggttaattaagaaaccagtggaaatagtc 502
Query: 304 tgtaatttttgttttatgtttcagactttttataaagaatcttaggcatggctaactttg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 503 tgtaatttttgttttatgtttcagactttttataaagaatcttaggcatggctaaatttg 562
Query: 364 accattcccctgtgtgcattttttaatcactttatctattttgtgagaattgtcccattc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 accattcccctgtgtgcattttttaatcactttatctattttgtgagaattgtcccattc 622
Query: 424 aggacagtgactggaggctagtga 447
||||||||||||||||||||||||
Sbjct: 623 aggacagtgactggaggctagtga 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 846
Length adjustment: 10
Effective length of query: 437
Effective length of database: 836
Effective search space: 365332
Effective search space used: 365332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
