CTTACTATTTCCAGAGGATCCGCGGAATTCTCACCTGATCCCTACCGAAT
GGCAGAGAAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAA
TGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCT
AAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAG
AGGAACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCT
GGAAATCAGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAT
GATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGG
TAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAG
CCAGAAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAG
AAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAA
TGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCC
TGAGTGAGGTAACACATTCACAAAGAAACTCACACAATATGTATTCACTG
ATAAGTGGATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAA
TTTGCTAAACACATCGAACTCCAGAAGAATGAAGACTGAAGTGTGGACAC
TATGCCCCCTCCTAGTATTGGGAAAAAACCCCCN

CATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGTAATAGTGAATAATTGTAAATAC
AATGCCAGTTGTAGAGAATTTATTAATGACACCGGGATAAATCGCAACTG
CATCTGACTCTACACATCCACACAAAGTGCCTCAGAGGTTTATGAATATA
AGTATTTGATAAATTTCACCACTGGTGTTTTGGGGCTATATCACAGTGAT
TTCACAAGGGATGACAATTTCATTTGCAATGACAATTACATTAAGTGTCA
ATTGTTATTTCGTGCAGTTTACTGGAGAAGAATCGTAACGAAAATTACAA
AAGATATGACGGGTCCTTAGGTGTTCATCTAAGAAGAAAAGCCTGGCTGT
GTTTTCTCTTCTTCTGTGATCAGAACTATGTTTCTAACTAGGCTTTCGGG
GAATGCTTAAAACCTGGATCAGTGATGGCATATGGATAAACCTTGGAGCT
GCCAACTATCACTAAGCAGGCAGTAGTAATGCTAACCAAGCCTTTACCAC
ATAACAGGCAGCCACAAGTGTTTTTCTTCCCTGCAGTGTCCCAAGCAGAA
GTGTTTAAAATATACATTAAATAATTATAATTATAAAACTAATATATTCT
ACCTAATCTATTACTTTCTATCTGATATTCACGTGACCCAGTGGCTTTTA
TCAGNTCTTGGTAAACGGTGTAAGCTCCCTTCTTGAATTCACAAA

Query= MSMg01no373_m18.g1 MSMg01no373_m18.g1 CHROMAT_FILE:
MSMg01no373_m18.g1 PHD_FILE: MSMg01no373_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:50 2005
         (600 letters)



>mm_chr3_129033554_129034553
          Length = 1000

 Score = 1137 bits (588), Expect = 0.0
 Identities = 597/600 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtaatagtgaataattgtaaatacaatgccagttgtagagaatttattaatgacaccgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 agtaatagtgaataattgtaaatacaatgccagttgtagagaatttattaatgacaccgg 669

                                                                       
Query: 61  gataaatcgcaactgcatctgactctacacatccacacaaagtgcctcagaggtttatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gataaatcgcaactgcatctgactctacacatccacacaaagtgcctcagaggtttatga 609

                                                                       
Query: 121 atataagtatttgataaatttcaccactggtgttttggggctatatcacagtgatttcac 180
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 608 atataagtatttgataaatttcactactggtgttttggggctatatcacagtgatttcac 549

                                                                       
Query: 181 aagggatgacaatttcatttgcaatgacaattacattaagtgtcaattgttatttcgtgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aagggatgacaatttcatttgcaatgacaattacattaagtgtcaattgttatttcgtgc 489

                                                                       
Query: 241 agtttactggagaagaatcgtaacgaaaattacaaaagatatgacgggtccttaggtgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 agtttactggagaagaatcgtaacgaaaattacaaaagatatgacgggtccttaggtgtt 429

                                                                       
Query: 301 catctaagaagaaaagcctggctgtgttttctcttcttctgtgatcagaactatgtttct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 catctaagaagaaaagcctggctgtgttttctcttcttctgtgatcagaactatgtttct 369

                                                                       
Query: 361 aactaggctttcggggaatgcttaaaacctggatcagtgatggcatatggataaaccttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aactaggctttcggggaatgcttaaaacctggatcagtgatggcatatggataaaccttg 309

                                                                       
Query: 421 gagctgccaactatcactaagcaggcagtagtaatgctaaccaagcctttaccacataac 480
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 308 gagctgccaactatcactaagcaggcaatagtaatgctaaccaagcctttaccacataac 249

                                                                       
Query: 481 aggcagccacaagtgtttttcttccctgcagtgtcccaagcagaagtgtttaaaatatac 540
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aggcagccacaagtatttttcttccctgcagtgtcccaagcagaagtgtttaaaatatac 189

                                                                       
Query: 541 attaaataattataattataaaactaatatattctacctaatctattactttctatctga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 attaaataattataattataaaactaatatattctacctaatctattactttctatctga 129


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space:   584100
Effective search space used:   584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)