NGTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCACAGTGTATCTTTCTGAAAGACCCTGAAAAAGCAGAGGGAAA
GCTAAAAAGCAACTTAACTTTTCATAAATTCAGGGGGAAAACAAAACAAA
ACAAAACAAAACGAAAATAAGCAAACAAAACACCAAACAAACAAAAATAA
AACAAAACAAAAAACGTTTCCATGGGATACTCCATTGACCTCCTATTGTT
ACCTGCTCTCTCTAACAAAGAATCTAGGTGTTTCATCAGATTCTCTTTCT
CATGGGTAAGAATTGGTAAAGAAAGTCACAGACAATGGCAAAAGGGGCTG
AGAGATTAGTCACTGCATTTTTTGGGCATCAGGGTAGTAAGCTCGAGGGA
AGGATTTCTGTGGGTTTCTTTTTATTTTTTTAATACTTTTATTTATGTTT
TTGAGAATTTCATGGAACATAATTTCATGATATTTTTTCTCCTCTCCAAA
TTCCTCCCAAATCCTCCTGTACCTCCCTAATCATCCACATTGATGGGCAT
TCCTCTCTTAAAAGGCATGGTCTGAGGCTCCCTACAGAGACATATACAGC
AGAGGACTGCCTGCTCTGGCATCAGTGGGAGAAGACACATAACCCTGGAG
ACAATTGAGGCCCCAGAGAGTGGGTAGACCTGGTGGGGACAGGGGTGGAT
GGGAGAAGGGGAGGGACATCCTCTTATAGGCGCGGGGTGAGATAAAATGT
GATGAGAAAGTGGGGA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCGCAATCTTTTGCTGCTGGGACAACTCTAACCTTG
ACGGACCTTCCTCCAAAATTGGTTTTTGGAAGGTGGAATTGAAGCAGGCC
CAAGGGCTTCTGGAAACCCCTTTAGGGAAAGGGGTATAACTGGCCAGGGG
GGAAACCCCCCTTAAACTTTGCCCCCAAAAGCCCCTGGAATCTGTCACAA
AGGAAATGGCGCCGCGGAAAAACCCGGAAAATGGAAAGGGGGGGGGGAAA
TTATATGGGGAAATTTTGGTTTTCCCCAAGAGGGGAAAAACCCCCCCCCC
GCTTTTTTTTTGTGGTCTAAAAAAATTTATCCCAAAATTGTGGTTCGGGG
GGGAAAACAAAAAAGAAAAGGGGGTAAAAAAAAAAAAAAAAAAAAATGTG
GCTCTCCCCTCCCCAAAAATTTTTCTATACAAAAAAAACACCTTCTTCTC
CCCTTCTTCTGGGGTGGGGGCCGGGCTTCCTTTCTCTTCTTTTTTTTTCC
CCGAAAAGAAGAGGGCGAGGCCACCACAAAAGAAAAAACACGAGAGGGCC
GTCCCATACCCTCCCCTCCTTCTCCAAAAAAAAAAAAGTGCTTTCTTTTC
CGTCCGGGGGGGCGCCCCCCAACTCCAACAAATACATACACCTCCTCCTT
GTTGTGTTTTTTTCCTCCTCCCCCCACAACCCGCGCAATCATTAG

Query= MSMg01no374_e02.b1 MSMg01no374_e02.b1 CHROMAT_FILE:
MSMg01no374_e02.b1 PHD_FILE: MSMg01no374_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:26 2005
         (591 letters)



>mm_chr3_81534484_81535474
          Length = 991

 Score = 1027 bits (531), Expect = 0.0
 Identities = 578/603 (95%), Gaps = 16/603 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccacagtgtatctttctgaaagaccctgaaaaagcagagggaaagctaaaaagca 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gaattccacagtgtagctttctgaaagaccctgaaaaagcagagggaaagctaaaaagca 248

                                                                       
Query: 65  acttaacttttcataaattcagggggaaaacaaaacaaaacaaaacaaaacgaaa----- 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
Sbjct: 249 acttaacttttcataaattcagggggaaaacaaaacaaaacaaaacaaaacaaaacaaaa 308

                                                                       
Query: 120 ----------ataagcaaacaaaacaccaaacaaacaaaaataaaacaaaacaaaaaacg 169
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 caaaacaaaaataagcaaacaaaacaccaaacaaacaaaaataaaacaaaacaaaaaacg 368

                                                                       
Query: 170 tttccatgggatactccattgacctcctattgttacctgctctctctaacaaagaatcta 229
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tttccatgggatactccattgacctcctattgttacctgctctctctaacaaagaatcta 428

                                                                       
Query: 230 ggtgtttcatcagattctctttctcatgggtaagaattggtaaagaaagtcacagacaat 289
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggtgtttcatcagattctctttctcatgggtaagaattggtaaagaaagtcacagacaat 488

                                                                       
Query: 290 ggcaaaaggggctgagagattagtcactgcatttttt-gggcatcagggtagtaagctcg 348
           |||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 489 ggcaaaagaggctgaaagattagtcactgcatttttttgggcatcagggtagtaagctcg 548

                                                                       
Query: 349 agggaaggatttctgtgggtttctttttatttttttaatacttttatttatgtttttgag 408
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 agggaaggatttctgtgggtttctttttatttttttaatacttttatttatgtttttgag 608

                                                                       
Query: 409 aatttcatggaacataatttcatgatattttttctcctctccaaattcctcccaaatcct 468
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 609 aatttcatggaacataatttcatgatattctttctcctctccaaattcctcccaaatcct 668

                                                                       
Query: 469 cctgtacctccctaatcatccacattgatgggcattcctctcttaaaaggcatggtctga 528
           ||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 669 cctgtacctccctaatcgtccacattgatgtgcattcctctcttaaaagccatggtctga 728

                                                                       
Query: 529 ggctccctacagagacatatacagcagaggactgcctgctctggcatcagtgggagaaga 588
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 ggctccctacagatacatatacagcagaggactgcctgctctggcatcagtgggagaaga 788

              
Query: 589 cac 591
           |||
Sbjct: 789 cac 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space:   569961
Effective search space used:   569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)