Query= MSMg01no374_e19.b1 MSMg01no374_e19.b1 CHROMAT_FILE:
MSMg01no374_e19.b1 PHD_FILE: MSMg01no374_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:30 2005
(499 letters)
>mm_chr3_44592848_44593746
Length = 899
Score = 683 bits (353), Expect = 0.0
Identities = 356/357 (99%)
Strand = Plus / Minus
Query: 142 ttccagtgatgttaggtaacctctgtgaaagtttcatttaactccataggggtcacaatg 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 ttccagtgatgttaggtaacctctgtgaaagtttcatttaactccataggggtcacaatg 840
Query: 202 cacaggctgaggaaaaactgctgtagagctgtcaggatattatggacatttccatgttgt 261
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 cacaagctgaggaaaaactgctgtagagctgtcaggatattatggacatttccatgttgt 780
Query: 262 agtagtctatagaatgtaagcacctttaattctttcttgatgaacacttaggatgtttcc 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 agtagtctatagaatgtaagcacctttaattctttcttgatgaacacttaggatgtttcc 720
Query: 322 atatttggattattgtgtataccactagtgcgaacaatggacagcccagccagttggaaa 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 atatttggattattgtgtataccactagtgcgaacaatggacagcccagccagttggaaa 660
Query: 382 ataattggttatgtagtagttctagttttaagtttaaaataattttatgcagttctctac 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ataattggttatgtagtagttctagttttaagtttaaaataattttatgcagttctctac 600
Query: 442 attagtggtacaatttataagtaagaaaatataacaaacagcttctctactttcttg 498
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 attagtggtacaatttataagtaagaaaatataacaaacagcttctctactttcttg 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_e19.g1 MSMg01no374_e19.g1 CHROMAT_FILE:
MSMg01no374_e19.g1 PHD_FILE: MSMg01no374_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:30 2005
(450 letters)
>mm_chr3_44435184_44436034
Length = 851
Score = 849 bits (439), Expect = 0.0
Identities = 448/451 (99%), Gaps = 1/451 (0%)
Strand = Plus / Plus
Query: 1 tattttgagtcttatgtgtgatatctgaactgtgcattggtgacttttcagctgaagcag 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattttgactcttatgtgtgatatctgaactgtgcattggtgacttttcagctgaagcag 260
Query: 61 atataactgcagaaaagggatggaattttt-gcattaattgtttgagttaaaggtgtttc 119
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 atataactgcagaaaagggatggaattttttgcattaattgtttgagttaaaggtgtttc 320
Query: 120 tctctgattctattttaagaatatttagattgctgactgttacaaagatttttatgtgaa 179
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctgcttctattttaagaatatttagattgctgactgttacaaagatttttatgtgaa 380
Query: 180 tatgagtaaaatcatattaaatatatatgcagattttctattttaaaaaagtccatctgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatgagtaaaatcatattaaatatatatgcagattttctattttaaaaaagtccatctgt 440
Query: 240 gactatatgttgtgttataacaacatttactcattactctgaaaataatcatgtaaaatt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gactatatgttgtgttataacaacatttactcattactctgaaaataatcatgtaaaatt 500
Query: 300 gaaattttaaaatactcataaaaattaattgactttcttttactaccactctgagcttat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaattttaaaatactcataaaaattaattgactttcttttactaccactctgagcttat 560
Query: 360 tgcattgttcattggatgaatatttattttcattattgtccttttccatctcattagtct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcattgttcattggatgaatatttattttcattattgtccttttccatctcattagtct 620
Query: 420 gtcttgctactgaatgaacagaacattctga 450
|||||||||||||||||||||||||||||||
Sbjct: 621 gtcttgctactgaatgaacagaacattctga 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 851
Length adjustment: 10
Effective length of query: 440
Effective length of database: 841
Effective search space: 370040
Effective search space used: 370040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
