TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAATCCGCGGAA
TTCCAGGACACTTGCCGAAGACAAACTTAAGTATAATAGGTATAAAAGAG
AGTGAAGATTCCCAATTTAAAGGGCCAGTAAATATCTTCAACAAAATTAT
AGAAGAAAACTTCCCTAGCCTAAAGAAAGGAATGCCCATGAACATACAAG
AAGCCTACAGAACTCCAAATAGACTGGAACAGAAAAGAAAATCCTCCCAT
CACATAAAATTAAAACACCAAATGCACAAATAAATAAAGAATATTAAAAG
CAGTAAAGAAAAAAGGTCAAGTAACATATTAAGACAGGCCTATTTGAATT
ATACCAGACTTCTCACCAGAGACTATGAAAGTCAGAAGATCCTGGACAGA
TGTTATACAGACCCTAAGAGAACACAAATGCCAGCCCAGGCTACTGTACC
CAGCAAAACTCTGAGTGGAGAAAACTAAATATTCTATGATAAAACCAAAT
TTACACAATATCTTTCCACAAATCCAGTCCTACAAAAGATAATAGATAGA
AAATACCAACACAAGGAAGGAAACTACACCCTAGAAAAAGCAAGAAAGTA
ATCTTCTTTCAACAAACCAAAAAAAAAAAAAAAAAAAAAAGATAGTCACA
AAAATATAATTCCCACCTATAACAACTAAAATAACAGAGANGTACAATCC
CTTTTCTTTAATATCCCTTTTAACATTAATGGAACTCACCTCCCCCTAAA
AGGATATTAGACTACCGAAAGGGTATTGTAATCCCG

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTTAATAAAATCTTTTTCACCTT
TTATTTATAGAGCTGGGGTGAACTGCAGCTATGTCTATCTTAATGAACAC
AATTAGCTCTAGTAAGATTTTAATTTTTCCTCAGGTCTAAATGTGACTTC
CAGAATTTCCACAGAGAATGGAAACTCATGGCAGTCTTGTTACACTGTTG
CACAGGCTACTGAACTCAGGCCTGTAGACTAGATGGTTGTTGGGTTTGCA
CTTTTCCTGGGGCAGGAGCCACATTTTTGAATCAGTGGGCCAAATGAATT
TATTGTTAGATCTAGTCAAAATAATTGTGTTATTTTTTTCATAAATAAAA
TAAAAAGCCTAACTACATTAAAAAGCACTACTTGGAAGATATTTGCTTAG
TCCCAGTGTCTATGCTAAAGGCCTTTCCTAAGATTATTGCGCTGTTCACT
TTAGGTAAATGCTGATAGTAGCTTAAAAACAGAGCTATTTTGTTTGGAGA
CTGAATGAACCTTAACAATCTATAAAGTCAGCTTTGGAATTCATGAGGTG
TACTTTAGTTTCTGTTAGTGGAATGTCAGTTAGTCTTGCCCTGCCACCTT
CTGGAAATTGTGTGAAAAGGTGCCCTGAAAAAAAAGCCAGACACTTGCCC
TTTCTCCCCTGGGTTTGGGGTGGGCCCAAATCCCACCCTTGTCTGGTTAA
AAATTGAATCCCGGAGTCAATATT

Query= MSMg01no374_j10.g1 MSMg01no374_j10.g1 CHROMAT_FILE:
MSMg01no374_j10.g1 PHD_FILE: MSMg01no374_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:52 2005
         (482 letters)



>mm_chr3_22042604_22043486
          Length = 883

 Score =  903 bits (467), Expect = 0.0
 Identities = 479/483 (99%), Gaps = 1/483 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttaataaaatctttttcaccttttatttatagagctggggtgaactgcagctatgtct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttaataaaatctttttcaccttttatttatagagctggggtgaactgcagctatgtct 260

                                                                       
Query: 61  atcttaatgaacacaattagctctagtaagattttaatttttcctcaggtctaaatgtga 120
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcttaacgaacacaattagctctagtaagattttaatttttcctcaggtctaaatgtga 320

                                                                       
Query: 121 cttccagaatttccacagagaatggaaactcatggcagtcttgttacactgttgcacagg 180
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttccagaatttccacagagaatagaaactcatggcagtcttgttacactgttgcacagg 380

                                                                       
Query: 181 ctactgaactcaggcctgtagactagatggttgttgggtttgcacttttcctggggcagg 240
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctactgaactaaggcctgtagactagatggttgttgggtttgcacttttcctggggcagg 440

                                                                       
Query: 241 agccacatttttgaatcagtgggccaaatgaatttattgttagatctagtcaaaataatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agccacatttttgaatcagtgggccaaatgaatttattgttagatctagtcaaaataatt 500

                                                                       
Query: 301 gtgttattttttt-cataaataaaataaaaagcctaactacattaaaaagcactacttgg 359
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgttattttttttcataaataaaataaaaagcctaactacattaaaaagcactacttgg 560

                                                                       
Query: 360 aagatatttgcttagtcccagtgtctatgctaaaggcctttcctaagattattgcgctgt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagatatttgcttagtcccagtgtctatgctaaaggcctttcctaagattattgcgctgt 620

                                                                       
Query: 420 tcactttaggtaaatgctgatagtagcttaaaaacagagctattttgtttggagactgaa 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcactttaggtaaatgctgatagtagcttaaaaacagagctattttgtttggagactgaa 680

              
Query: 480 tga 482
           |||
Sbjct: 681 tga 683


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 883
Length adjustment: 10
Effective length of query: 472
Effective length of database: 873
Effective search space:   412056
Effective search space used:   412056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)