NTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAAAAAAT
GTTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAATCCTGAGT
TTCCACCTCCCTCCAGCCAGAATGGCTAAGATCAAAAATTCAGGTGACAG
CAGTTGCTGGCGAGGATGTGGAAAAAGAGGAATACTCCTCCATTGTTGTT
GGGATTGCAAACTTGTACAACCACTCTGCAAATCAGTCTGGCAGTTCCTC
AGAAAATTGGACATAGTACTACTGGAGGATCCTGCAATACCTCTTTTGGG
CATATATTCAGGAAATATTCCAACTGGCAAGAAGGACACATGCTCAACTA
TGTTCATAGCAGCCTTATTTGTAATAGCCAGAAGCTGGAAAGAACCCAGA
TGCCCCTCAACAGAGGAATGGATACAGAAAATATGGTACATTTGCACAAG
GGAGTACTATTCAGCTATTACAAAGAATGAATTTATGAAATTGTTAGGCA
AATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACCA
TAGAACTCACATGATATGTATTCCCTGATAAGGGGATATTATCTCCAAAA
CTTTAAAAAACCCGATACAGAAACCAATTGGGGAACCCATGGAACCCCAC
AAAAAAAAAGACCAAAGGGGGGGCCTTTGCCCCTTCTTAAAATTGGGAAA
AAAA

CCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATGGAATCAAGTATTTCCGTGTTT
GTCATATCTATTTTCTTGTTCACTAGATGTCCTAAGGATTACAACAGACT
AAAATAATGGCCCTCTGATTCTTCTGATTTGCAGAAGAGAACGATTTAGT
CCTCAGAACTATGTTCCTGAACACCATGGAAACTTCTGTTAAATGGATTC
AAAATTAAAGACTAAAGAAGTGAGGGCCTTAAATATTTTTCTCTTCAAAT
ACAAAATACAAATGCTTATCTTTCCATTGTCCTCCCTGGATAGAATTTTA
ATTCTAAGTGAAAATGCATATGATTAACTGTAAAGAATGGCAGTCTAGAA
ACAAGAATGAAGATTAATAAATAATTTATATTGCAGTATTTTTTATTATC
ATGAGTCAACTTTTTCCCTTTGAAGGGTCATTTGGGCAAATCTGAACGTC
TTATCCCCTGTTTTGTGACTGGGAGTTAACAAAGATTAATTTCAATTTTT
AATATCTATCCACATTTAATATCGATTCCAGCAGTTGAGTACCTAGATAT
ATCCAAAAAATAAAAAGGATATTGCTCTCGTTTAAGGACTACCACCAGAC
AAGCATGCGCCGAAAGATGAACGGTGAAACCCAATTTATTACACTTGGGC
TTATTTTTCCTAAATCCATTATCCACTAAAATTTTTTAATCCCGN

Query= MSMg01no376_e15.g1 MSMg01no376_e15.g1 CHROMAT_FILE:
MSMg01no376_e15.g1 PHD_FILE: MSMg01no376_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:09 2005
         (499 letters)



>mm_chr3_133928353_133929251
          Length = 899

 Score =  934 bits (483), Expect = 0.0
 Identities = 495/499 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggaatcaagtatttccgtgtttgtcatatctattttcttgttcactagatgtcctaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 atggaatcaagtatttccgtgtttgtcatatctattttcttgttcactagatgtcctaag 640

                                                                       
Query: 61  gattacaacagactaaaataatggccctctgattcttctgatttgcagaagagaacgatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 639 gattacaacagactaaaataatggccctctgattcttctgatttgcagaagagaatgatt 580

                                                                       
Query: 121 tagtcctcagaactatgttcctgaacaccatggaaacttctgttaaatggattcaaaatt 180
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tagtcctcggaactatgttcctgaacaccatggaaacttctgttaaatggattcaaaatt 520

                                                                       
Query: 181 aaagactaaagaagtgagggccttaaatatttttctcttcaaatacaaaatacaaatgct 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 519 aaagactaaagaagtgagggccttaaatatttttctcttcaaatacaaaatacaaacgct 460

                                                                       
Query: 241 tatctttccattgtcctccctggatagaattttaattctaagtgaaaatgcatatgatta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tatctttccattgtcctccctggatagaattttaattctaagtgaaaatgcatatgatta 400

                                                                       
Query: 301 actgtaaagaatggcagtctagaaacaagaatgaagattaataaataatttatattgcag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 actgtaaagaatggcagtctagaaacaagaatgaagattaataaataatttatattgcag 340

                                                                       
Query: 361 tattttttattatcatgagtcaactttttccctttgaagggtcatttgggcaaatctgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tattttttattatcatgagtcaactttttccctttgaagggtcatttgggcaaatctgaa 280

                                                                       
Query: 421 cgtcttatcccctgttttgtgactgggagttaacaaagattaatttcaatttttaatatc 480
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 catcttatcccctgttttgtgactgggagttaacaaagattaatttcaatttttaatatc 220

                              
Query: 481 tatccacatttaatatcga 499
           |||||||||||||||||||
Sbjct: 219 tatccacatttaatatcga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space:   434721
Effective search space used:   434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)