Query= MSMg01no377_e03.b1 MSMg01no377_e03.b1 CHROMAT_FILE:
MSMg01no377_e03.b1 PHD_FILE: MSMg01no377_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:22 2005
(515 letters)
>mm_chr3_107501020_107501932
Length = 913
Score = 946 bits (489), Expect = 0.0
Identities = 505/511 (98%), Gaps = 2/511 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcctatgacaagcctgtggatgtttgaagagggctgttgaagtacctagaagg 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcctataagaagcctgtggatgtttgaagagggctgttgaagtacctagaagg 264
Query: 65 attgctatgtcttaaaatgttagtgttctctcatgtactcactgttcagagcagtcagac 124
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 265 attgctatgtcttaaaatgttagtgttctctcatgtgctcactgttcagagcagtcagac 324
Query: 125 ttctctccttgggaattctatggccacagagggcagagagatgaaaccagagtattaagc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 325 ttctctccttgggaattctatggccacagagggcagagagatgaaaccagagtagtaagc 384
Query: 185 acatccacacagggccaggcggccactctctccttagagctggggcctgcaaccacaact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acatccacacagggccaggcggccactctctccttagagctggggcctgcaaccacaact 444
Query: 245 ggcccactcgggagctttcatcttttttattttgtccacactgttattggagccccatag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggcccactcgggagctttcatcttttttattttgtccacactgttattggagccccatag 504
Query: 305 attcaattcacctgagtctttagaaatcagctaagaaactctaagtctcctgaattaaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attcaattcacctgagtctttagaaatcagctaagaaactctaagtctcctgaattaaaa 564
Query: 365 aaaaatatatatgtgtcttgagacaaattatttttaacaagctctagtgtatctatattt 424
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaaaatatat--gtgtcttgagacaaattatttttaacaagctctagtgtatctatattt 622
Query: 425 tggatttgacttttttaaagcagtttttcttcaggtgctttgtactttctctgggcattt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tggatttgacttttttaaagcagtttttcttcaggtgctttgtactttctctgggcattt 682
Query: 485 tagcttcgctgtgagcttcctggagattgaa 515
|||||||||||||||||||||||||||||||
Sbjct: 683 tagcttcgctgtgagcttcctggagattgaa 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 913
Length adjustment: 10
Effective length of query: 505
Effective length of database: 903
Effective search space: 456015
Effective search space used: 456015
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_e03.g1 MSMg01no377_e03.g1 CHROMAT_FILE:
MSMg01no377_e03.g1 PHD_FILE: MSMg01no377_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:22 2005
(432 letters)
>mm_chr3_107645543_107646374
Length = 832
Score = 820 bits (424), Expect = 0.0
Identities = 430/432 (99%)
Strand = Plus / Minus
Query: 1 aggaaatggaaaccaccttagatctatttcttggagatctgacttttggcccaaatggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 aggaaatggaaaccaccttagatctatttcttggagatctgacttttggcccaaatggtt 573
Query: 61 cttaaggcactaaggtctgaggtggaagaatgcctttgtacccagcactcaatgacgacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 cttaaggcactaaggtctgaggtggaagaatgcctttgtacccagcactcaatgacgacc 513
Query: 121 ccagaaatgacacaggaagcaaggaggagcagctgtccttctttggtccattttgaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ccagaaatgacacaggaagcaaggaggagcagctgtccttctttggtccattttgaaatg 453
Query: 181 ttggccaacagttggtcctcaagctccactaggccagaacacatccaccaactgatttcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttggccaacagttggtcctcaagctccactaggccagaacacatccaccaactgatttcg 393
Query: 241 gccatttctacttcttttctggacgtcaatgccggtgggatttgtcacatggcactcact 300
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 392 gtcatttctacttcttttctggacgtcaatgccggtgggatttgtcacgtggcactcact 333
Query: 301 agggtgatcaatagacatttttgctactgtaactgactatttttagtaggaaaggcttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 agggtgatcaatagacatttttgctactgtaactgactatttttagtaggaaaggcttga 273
Query: 361 tattttttccagcctctctgttgaccttcccatggggagaatgcaggtgaagttcagata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tattttttccagcctctctgttgaccttcccatggggagaatgcaggtgaagttcagata 213
Query: 421 gtctatgagtat 432
||||||||||||
Sbjct: 212 gtctatgagtat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
