Query= MSMg01no377_k15.b1 MSMg01no377_k15.b1 CHROMAT_FILE:
MSMg01no377_k15.b1 PHD_FILE: MSMg01no377_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:55 2005
(547 letters)
>mm_chr3_154654412_154655358
Length = 947
Score = 1004 bits (519), Expect = 0.0
Identities = 537/543 (98%)
Strand = Plus / Plus
Query: 5 gaattctcccgattacttatagcagtaattaatgaattctagcagctgcgtttaaaaaca 64
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcccgagaaattatagcagtaattaatgaattctagcagctgcgtttaaaaaca 264
Query: 65 aaagagatgacatgaacactgaggtttcaggccagttcaattgaaagcacacagctagaa 124
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 265 aaagagatgacatgaacactgaggtttcaggccagtacaattgaaagcacagagctagaa 324
Query: 125 cacccagtaattccttttcagcttcctccttaattaacaccagaaacctgactacctgat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacccagtaattccttttcagcttcctccttaattaacaccagaaacctgactacctgat 384
Query: 185 gaactgcaggatacccacattaattttctgtaggacaacagctgttagtcatccattgtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaactgcaggatacccacattaattttctgtaggacaacagctgttagtcatccattgtt 444
Query: 245 ccttacaggttcctcatttaacaataatgttgagagtgttatccacaaatacatcagagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccttacaggttcctcatttaacaataatgttgagagtgttatccacaaatacatcagagc 504
Query: 305 gaacggcacagggagctcagcatatccacagtcgtagacgctttaggcgcccaaagctct 364
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 505 gaacggcacagggagctcagcatatccacagttgtagacgctttaggcgcccaaagctct 564
Query: 365 gctgtttgacatctactggaaccacatatggatcatgtgcgttttagagtaagagtctgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gctgtttgacatctactggaaccacatatggatcatgtgcgttttagagtaagagtctgt 624
Query: 425 tacaataatgtcttccctgcgtcagccagagatctgctacaggaccaaaggcacactagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tacaataatgtcttccctgcgtcagccagagatctgctacaggaccaaaggcacactagt 684
Query: 485 acttcactcactagccatcctaagccctgcttacccaaattcaggaggtataaacaaaag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acttcactcactagccatcctaagccctgcttacccaaattcaggaggtataaacaaaag 744
Query: 545 ccc 547
|||
Sbjct: 745 ccc 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_k15.g1 MSMg01no377_k15.g1 CHROMAT_FILE:
MSMg01no377_k15.g1 PHD_FILE: MSMg01no377_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:55 2005
(252 letters)
>mm_chr3_154840833_154841482
Length = 650
Score = 443 bits (229), Expect = e-129
Identities = 245/251 (97%), Gaps = 2/251 (0%)
Strand = Plus / Minus
Query: 1 tgtgtcatttgccactgactgacctcatttgatacttctgaatgtattaaaggtttatga 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 449 tgtgtcatttgccactgactgacctcatttgatacttctgaatgtattacaggtttatga 390
Query: 61 tccatttgtgatatgccaactggtctcactttatttcaaacaaatgtaatgatgacatga 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 389 tccatttgtgatatgccaactggtctcaccttatttcaaacaaatgtaatgatgacatga 330
Query: 121 ccgttcacaaaaggatgtgaagtggttgctactgttggaaaactctcctgacttctcagc 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cccttcacaaaaggatgtgaagtggttgctactgttggaaaactctcctgacttctcagc 270
Query: 181 acagagacacagccttaaacagtgagcagaggttacagcattactatgaggggggggggg 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 269 acagagacacagccttaaacagtgagcagaggttacagcattactatg--gggggcgggg 212
Query: 241 gtaaagaatga 251
|||||||||||
Sbjct: 211 gtaaagaatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 650
Length adjustment: 9
Effective length of query: 243
Effective length of database: 641
Effective search space: 155763
Effective search space used: 155763
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
