Query= MSMg01no377_n07.b1 MSMg01no377_n07.b1 CHROMAT_FILE:
MSMg01no377_n07.b1 PHD_FILE: MSMg01no377_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:09 2005
(414 letters)
>mm_chr3_133777070_133777884
Length = 815
Score = 756 bits (391), Expect = 0.0
Identities = 406/411 (98%), Gaps = 1/411 (0%)
Strand = Plus / Plus
Query: 5 gaattc-aacatctttctgcggctccgtcttcatttgccaagttgggtgattctacttga 63
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaacagctttctgcggctccgtcttcatttgccaagttgggtgattctacttga 264
Query: 64 gttattgaaacctttttactatagacattaaaggcaaactttagactctatttaagaaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttattgaaacctttttactatagacattaaaggcaaactttagactctatttaagaaag 324
Query: 124 tgtccctggaaaaagacactgaaaataattctttcctattgtattatcctctagaaaaag 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtccctgggaaaagacactgaaaataattctttcctattgtattatcctctagaaaaag 384
Query: 184 aagcaaggaataaaccaaatgctgtgtgttccctgggaacaggaagtctgttaaaagacc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagcaaggaataaaccaaatgctgtgtgttccctgggaacaggaagtctgttaaaagacc 444
Query: 244 cccaggagcaagagagcaaagcatgggtgcctgtgtgacagtgacaggatcacatcacaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cccaggagcaagagagcaaagcatgggtgcctgtgtgacagtgacaggatcacatcacaa 504
Query: 304 aggcccctgcagctgtgtggggcctgtggagctgactcctgtcagaggcgtgattagtgc 363
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 505 aggcccctgcagctgtgtggggcctgtggagctgactcctgtcagaggcatgattagtgc 564
Query: 364 aaccccctagtggaactgtccattgagggtggcgaccaatttaaaaacaag 414
|||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 565 aaccccctagtggaactgtccattgagggtggtgaccaatttaaaaacaag 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 815
Length adjustment: 9
Effective length of query: 405
Effective length of database: 806
Effective search space: 326430
Effective search space used: 326430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_n07.g1 MSMg01no377_n07.g1 CHROMAT_FILE:
MSMg01no377_n07.g1 PHD_FILE: MSMg01no377_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:09 2005
(373 letters)
>mm_chr3_133915999_133916771
Length = 773
Score = 685 bits (354), Expect = 0.0
Identities = 369/374 (98%), Gaps = 2/374 (0%)
Strand = Plus / Minus
Query: 1 ctaaatagagataaggaaggtggcactaagattttcgactgagaatgataaaatactttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ctaaatagagataaggaaggtggcactaagattttcgactgagaatgataaaatactttg 514
Query: 61 ttaatatttgtttgcattgctttctaaaacaaaggattccatcattcacctggggccttc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ctaatatttgtttgcattgctttctaaaacaaaggattccatcattcacctggggccttc 454
Query: 121 aaaatttctaccgtgaagcgggtggaatctaacacaatggttttaaagagttagaatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aaaatttctaccgtgaagcgggtggaatctaacacaatggttttaaagagttagaatttg 394
Query: 181 agaatagcagtattctcacactgattaaaaatacagttccatgtggttattgacagtgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agaatagcagtattctcacactgattaaaaatacagttccatgtggttattgacagtgag 334
Query: 241 tggaacccacatcatcgaatcagtttctgattttcacactgtgacgggg-aaaaaaatgt 299
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 333 tggaacccacatcatcgaatcagtttctgattttcacactgtgatgggggaaaaaaatgt 274
Query: 300 ttttcagccaaagtccatgcaatttcagggtgcacagagccaatgaacactgcttggaga 359
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 273 ttttcagccaaagtccatgcaatttcagggtgcac-gagccaatgaacgctgcttggaga 215
Query: 360 ctttctgggatatc 373
||||||||||||||
Sbjct: 214 ctttctgggatatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
