NTTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCATGAAATTCTTCGGCAAATGGATGCATCTGGAGGATATCATCCT
GAGTGAGGTAACCCAATCACAACAAAACACACATGGTATGCACTCACTGA
TAAGCAGATATTAGCCCATAAACTTAGAATATCCAAGATACAATTTGCAA
AACACATGAAACTCAAGAAGAAGGAAGACCAAAATGTAGATACTTCGTTC
CTTCTTAGTTTGGGGAACAAAGTACCCATGGAAGGAGTTACAGAGACAAA
GTTTGGAGCTAAGACGGAAGGAAAGACCATCCAGAGACTGCCCCACCAGG
GGATCCATCCCATATACAACCACCAAACCCAGACACTATTGCATATGCCA
GAAAGATTTGGCTGACAGGACCCTGCCATAGCTCTCTCATGTGAGTCTAT
GCCAATGCCTGGAAAATACAGAAGTGGATGCCCACAGTCATCTATTGGAT
GGATTACAGGGCCCCTAATGAAAGAGCTAAAGAAAGTACTCAAGGCACTA
AAAGGGTCTGCAACCCTATAGGAAGAACAACAATATGAACTAATCAGTAG
CCCCCAGAGGTGTGTCTCCAGTTGCATATGTAGCAGAGGATGGNCTAGTG
GGCCATCAATGGGAGGAGAGGCCCTTGGGTTTGGGGAAGATCATAGGGCC
CAGTACAGGGGACTGCCAAGGCCAAAAAATTGGAGTGGGTGGGTTGGGNA
ACCAGAATAGGGA

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTCTGTCTACATTAGCCTGGGCTAC
TATGTCAAAATTCCGCTGGCCAGATGGCTTGTAAACAACAAAGCTTTATC
TCTAACATCTAAGATGCTCAGTAGGCCAGCCTGGATGGACTCTAGGGAGG
GCTGTATTCAGGGCAGGAGACAGCTGCCTTATATCCTGGCAGGGCTACCC
AGCTCTTGATCTGTTCACGTAAGGGCCATTCATGAGGACTCCACGCATTT
AACATAACTACCCCCAAAAGGCCGTGCTACCCCTTAAACCATCAGGTCTG
AGTGTTGGACTTAGGGTTTCAATGTATGAACTTGGAGCAGAAAATGAATA
TTCCGTCCAAGCATCCCCCAGATCTGTTCTGTGAGTTTGAGATAGACCCA
TGGCATGATAAAGGTAGGTGTCCATCAAGATCTACTTACTCAACCAGACT
CTCTATACCGCTATGTCTACCTTAGACAGAAACGAGGGGCGGAAGTTTAC
TGATCCTCCTCAATGAAACACTATTAAGACATGTACTTGCTCTATCTGGG
AAATAATTGTCTCATTGACGTAACCAGAACTAGACCCTCCCTTCCACCTT
TGTTATTAGTGGTCATTATCACACTTGGGGCCTTTATGGAATGGGTTTAT
TCCTTTTTATTAAAACTTTCCGCTTAACCTTCCCTTTAATAAAAATTCTG
TATTGCCACTTACCCG

Query= MSMg01no378_d19.g1 MSMg01no378_d19.g1 CHROMAT_FILE:
MSMg01no378_d19.g1 PHD_FILE: MSMg01no378_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:41 2005
         (533 letters)



>mm_chr3_145004385_145005317
          Length = 933

 Score =  977 bits (505), Expect = 0.0
 Identities = 526/533 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   actctgtctacattagcctgggctactatgtcaaaattccgctggccagatggcttgtaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctgtctacattagcctgggctactatgtcaaaattccgctggccagatggcttgtaa 260

                                                                       
Query: 61  acaacaaagctttatctctaacatctaagatgctcagtaggccagcctggatggactcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaacaaagctttatctctaacatctaagatgctcagtaggccagcctggatggactcta 320

                                                                       
Query: 121 gggagggctgtattcagggcaggagacagctgccttatatcctggcagggctacccagct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggagggctgtattcagggcaggagacagctgccttatatcctggcagggctacccagct 380

                                                                       
Query: 181 cttgatctgttcacgtaagggccattcatgaggactccacgcatttaacataactacccc 240
           ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 cttgacctgttcacgtaagggccattcatgaggactccacgcatttaacataactacctc 440

                                                                       
Query: 241 caaaaggccgtgctaccccttaaaccatcaggtctgagtgttggacttagggtttcaatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaaaggccgtgctaccccttaaaccatcaggtctgagtgttggacttagggtttcaatg 500

                                                                       
Query: 301 tatgaacttggagcagaaaatgaatattccgtccaagcatcccccagatctgttctgtga 360
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 tatgaacttggagcagaaaatgaatattccatccaagcatcccccagatctgttctgtga 560

                                                                       
Query: 361 gtttgagatagacccatggcatgataaaggtaggtgtccatcaagatctacttactcaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtttgagatagacccatggcatgataaaggtaggtgtccatcaagatctacttactcaac 620

                                                                       
Query: 421 cagactctctataccgctatgtctaccttagacagaaacgaggggcggaagtttactgat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagactctctataccgctatgtctaccttagacagaaacgaggggcggaagtttactgat 680

                                                                
Query: 481 cctcctcaatgaaacactattaagacatgtacttgctctatctgggaaataat 533
           ||||||  |||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 cctccttgatgaaatactattaagacatgtacttgctctacctgggaaataat 733


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space:   482729
Effective search space used:   482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)