ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAGGATCCGCGGAAT
TCTACAGTTTACGGACTCTAATTGGATTTCCTGAGGCACTCATATGCCTT
CCTTGTCCTTCTGCTTACTTTAGTGATTTTCACTATTCAGTATAAATTTT
ACAAAGATTCATTTCTACAGTCCTTATTTTTATCAAAAGGTGAAAATGAA
AACATTTCTATCCAAACTCTTAGTTTTCATGCCTTGTGAGAAAAGCCCAC
TTGCTTGTAAAAGTGTTACAGTACAATATGTAAAATTGTATAGAACAAAA
ACTACAGTTCAGCGAATTTATATTCTCTGAACACAGCACCCTAGCTAAAA
TCTATAAGAAATGGAACACTGTAGCTTTCTGCCATCATCATATAACTGCT
AGGCATACATTATCCAGATCTCCAGCATTATGCACTAGCTCTGCCCCATT
TTGTCTTTCAGTCATGCATTACTTCCTATCTTACTTCTCTCTGCCTTACA
TTTGTAAAATTTAGCTGTATGATTGGTTTATATGTGAATCTATCATTGTT
GAATAAGGTTCTGTTGTGTGACTATACTACAAATATTCCATCTTATTATT
GATGGACTTTTAAGGACTCCATGAACTCCTGTCTATTCTGGGTTTGGATT
GTTATCATTGATAAAACTATGCATTATGAACCGTGCTTATATACTCACCT
TTACTTGAAATATCCTTGGAATCCCCTTTCCAA

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGA
GAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAAC
ACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAAT
CAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCA
GCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAA
GGACACATGCTCCACTATGTTCATAGCAGCTTTATTTATAATAGCCAGAA
GCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATG
TGGTACATCTACACAATGGAGTACTACTCAGCTATTACAAGGAATGAATT
TATGAAATTCCTAGTCAAATGGACGGACCTGGAGGGCATCATCCTGAGTG
AGGTAACATCTTTTTAAAGAAACTCCCACACTATGTTTCTCCTTGAAAGC
GGTTACTACCCCCCCATTTTGATACCTTACACACTCCATACTCTTTGGCT
AACATCCGGACTCCTCCCATTAATTCACTATTGTTCCGGGGCCC

Query= MSMg01no379_m08.b1 MSMg01no379_m08.b1 CHROMAT_FILE:
MSMg01no379_m08.b1 PHD_FILE: MSMg01no379_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:37 2005
         (563 letters)



>mm_chr3_63185223_63186185
          Length = 963

 Score = 1033 bits (534), Expect = 0.0
 Identities = 549/554 (99%)
 Strand = Plus / Plus

                                                                       
Query: 10  gaattctacagtttacggactctaattggatttcctgaggcactcatatgccttccttgt 69
           ||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaattctacagctcatggactctaattggatttcctgaggcactcatatgccttccttgt 269

                                                                       
Query: 70  ccttctgcttactttagtgattttcactattcagtataaattttacaaagattcatttct 129
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ccttctgcttactttagtgattttcactattcagtataaattttacaaagattcatttct 329

                                                                       
Query: 130 acagtccttatttttatcaaaaggtgaaaatgaaaacatttctatccaaactcttagttt 189
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 acagtccttatttttatcaaaaggtgaaaatgaaaacatttctatccaaactcttagttt 389

                                                                       
Query: 190 tcatgccttgtgagaaaagcccacttgcttgtaaaagtgttacagtacaatatgtaaaat 249
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tcatgccttgtgagaaaagcccacttgcttgtaaaagtgttacagtacaatatgtaaaat 449

                                                                       
Query: 250 tgtatagaacaaaaactacagttcagcgaatttatattctctgaacacagcaccctagct 309
           |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 450 tgtatagaacaaaaactacagttcagcgaactgatattctctgaacacagcaccctagct 509

                                                                       
Query: 310 aaaatctataagaaatggaacactgtagctttctgccatcatcatataactgctaggcat 369
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aaaatctataagaaatggaacactgtagctttctgccatcatcatataactgctaggcat 569

                                                                       
Query: 370 acattatccagatctccagcattatgcactagctctgccccattttgtctttcagtcatg 429
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 acattatccagatctccagcattatgcactagctctgccccattttgtctttcagtcatg 629

                                                                       
Query: 430 cattacttcctatcttacttctctctgccttacatttgtaaaatttagctgtatgattgg 489
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 cattacttcctatcttacttctctctgccttacatttgtaaaatttagctgtatgattgg 689

                                                                       
Query: 490 tttatatgtgaatctatcattgttgaataaggttctgttgtgtgactatactacaaatat 549
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tttatatgtgaatctatcattgttgaataaggttctgttgtgtgactatactacaaatat 749

                         
Query: 550 tccatcttattatt 563
           ||||||||||||||
Sbjct: 750 tccatcttattatt 763


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space:   527009
Effective search space used:   527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)