Query= MSMg01no381_f02.b1 MSMg01no381_f02.b1 CHROMAT_FILE:
MSMg01no381_f02.b1 PHD_FILE: MSMg01no381_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:41 2005
(631 letters)
>mm_chr3_30115586_30116616
Length = 1031
Score = 1181 bits (611), Expect = 0.0
Identities = 623/627 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaagctttatctcaggaggttagagtaactgttccttgaacctggccatcctta 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattcaaagctttatctcaggaggttagagtaactcttccttgaacctggccatcctta 264
Query: 65 ccaaccaaccttacacaatttgttttaccaacaatgacagacataggagtcacctgtgac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaaccaaccttacacaatttgttttaccaacaatgacagacataggagtcacctgtgac 324
Query: 125 tctgagtaatcacctagattttccatgacattatctccttgactctatcaccctttaact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgagtaatcacctagattttccatgacattatctccttgactctatcaccctttaact 384
Query: 185 gtggagttcctaatttaacaatgcaaagaacacatataaaaatacttcctactaagtcct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtggagttcctaatttaacaatgcaaagaacacatataaaaatacttcctactaagtcct 444
Query: 245 agtgcggaattcctagaagttagtaggagaagagaggccacacccagcttttactccacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 445 agtgcggaattcctagaagttagtaggagaagagaggccacacccagcttttactccgcc 504
Query: 305 cctcatggggaaacttggaatgtctcatttttgtgttcactcatttcctttccttctcgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cctcatggggaaacttggaatgtctcatttttgtgttcactcatttcctttccttctcgc 564
Query: 365 tggtaataatacaatcatcagcaccattacgaaacttggaggggacaatgagggttaaag 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tggtaataatacgatcatcagcaccattacgaaacttggaggggacaatgagggttaaag 624
Query: 425 cagggaccagacagctctatgctctccatacaggccaatctcataccttcctgccaggac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagggaccagacagctctatgctctccatacaggccaatctcataccttcctgccaggac 684
Query: 485 actaggacaaatcatggcacggatgcttttcttatactagatacactttctcagcacaga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 actaggacaaatcatggcacggatgcttttcttatactagatacactttctcagcacaga 744
Query: 545 agaacatagtggaataaataaggagagggaggataactctatctaacaggttcctctttg 604
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 745 agaacatagtggaataaataaggagagggaggataactctatctaaaaggttcctctttg 804
Query: 605 aagtggatggccccactcctctctgct 631
|||||||||||||||||||||||||||
Sbjct: 805 aagtggatggccccactcctctctgct 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_f02.g1 MSMg01no381_f02.g1 CHROMAT_FILE:
MSMg01no381_f02.g1 PHD_FILE: MSMg01no381_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:41 2005
(438 letters)
>mm_chr3_30240762_30241597
Length = 836
Score = 789 bits (408), Expect = 0.0
Identities = 430/440 (97%), Gaps = 6/440 (1%)
Strand = Plus / Minus
Query: 1 ttctttaaaatcatagaactgcctagaaatttaagccttttgagattgattaatgcagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ttctttaaaatcatagaactgcctagaaatttaagccttttgagattgattaatgcagaa 577
Query: 61 aatgttagcagtttcagagatttgttctgtctgataaagcaatactaataataatactat 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aatgttagcagtttcggagatttgttctgtctgataaagcaatactaataataatactat 517
Query: 121 ctgttcaaattaaatggttggaaaaggatcacgttactaggaaacaagtgtctttttgga 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 516 ctgttcaaattaaatggttggaaaaggattacgttactaggaaacaagtgtctttttgga 457
Query: 181 ggtatacatatatttcaattctgaattcaaattttttttgtatttacttttaaaatagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggtatacatatatttcaattctgaattcaaattttttttgtatttacttttaaaatagtt 397
Query: 241 ttatctgctcaaacaagaacaaatttcatctctagtttatttataattcatacaaattaa 300
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 396 ttatctgctcagacaagaacaaatttcatctctag----tttataattcatacaaattaa 341
Query: 301 tggtttttagtaattaattaataattcaaattttat--agtgattaagaagaaaagatgg 358
|||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 340 tggtttttagtaatcaattaataattcaaattttataaagtgattaagaagaaaagatgg 281
Query: 359 actgtttcatcattttcacgtaatacttgggtaaattatactgatagcttccattgtgaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 actgtttcatcattttcacgtaatacttgggtaaattatactgatagcttccattgtgaa 221
Query: 419 tgttacagctgggctagttt 438
||||||||||||||||||||
Sbjct: 220 tgttacagctgggctagttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 836
Length adjustment: 9
Effective length of query: 429
Effective length of database: 827
Effective search space: 354783
Effective search space used: 354783
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
