Query= MSMg01no382_k21.b1 MSMg01no382_k21.b1 CHROMAT_FILE:
MSMg01no382_k21.b1 PHD_FILE: MSMg01no382_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:30 2005
(502 letters)
>mm_chr3_63353097_63353998
Length = 902
Score = 940 bits (486), Expect = 0.0
Identities = 495/498 (99%), Gaps = 1/498 (0%)
Strand = Plus / Plus
Query: 5 gaattcaagaaagtacctcaatgctgttagtaatttattataaaatgatacaactaagaa 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagaaagtacgtcaatgctgttagtaatttattataaaatgatacaactaagaa 264
Query: 65 ataaccagatgtgtattaggcaaaacttcatagtgtaggactgatacatgtgactaaaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataaccagatgtgtattaggcaaaacttcatagtgtaggactgatacatgtgactaaaca 324
Query: 125 taataaaaagtggcttctttaaaaatattctacaatgaagactgcttagtcagatatccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taataaaaagtggcttctttaaaaatattctacaatgaagactgcttagtcagatatccc 384
Query: 185 aatttgtctcagtgactagtgtctagagaaatcagtcaaagccattattattgtattgat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatttgtctcagtgactagtgtctagagaaatcagtcaaagccattattattgtattgat 444
Query: 245 tgtactcaactttgcctatcatgaatacataacagcttaacctgtagttttattatctcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtactcaactttgcctatcatgaatacataacagcttaacctgtagttttattatctcc 504
Query: 305 ttaagtattatcaacaatagaagttgctactgtttatctacttatttcagtatgtagtga 364
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttaagtattatcaacaatggaagttgctactgtttatctacttatttcagtatgtagtga 564
Query: 365 actacaacattcccattcacttatcacaacttattttttaaaatttttattagatgtttt 424
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 565 actacaacattcccattcacttatcacaacttattttttaaa-tttttattagatgtttt 623
Query: 425 ccttatttacatttcaaatgttaccccctttcctggtttcccctccagaaaccccctatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccttatttacatttcaaatgttaccccctttcctggtttcccctccagaaaccccctatc 683
Query: 485 ctaccccctccccctgct 502
||||||||||||||||||
Sbjct: 684 ctaccccctccccctgct 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_k21.g1 MSMg01no382_k21.g1 CHROMAT_FILE:
MSMg01no382_k21.g1 PHD_FILE: MSMg01no382_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:30 2005
(396 letters)
>mm_chr3_63534515_63535310
Length = 796
Score = 745 bits (385), Expect = 0.0
Identities = 385/385 (100%)
Strand = Plus / Minus
Query: 12 tatcgtgtgaccatagcaacttttataaagggagagatttaactggggctggcttatagt 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tatcgtgtgaccatagcaacttttataaagggagagatttaactggggctggcttatagt 737
Query: 72 tcagaggtttagtccattatcatcatggcaagaagcaaggtgccatgcaggcggacatag 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tcagaggtttagtccattatcatcatggcaagaagcaaggtgccatgcaggcggacatag 677
Query: 132 tgctggagaggtagcttagagtcagtaggaagcaggaagagagggacaataggcctggat 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tgctggagaggtagcttagagtcagtaggaagcaggaagagagggacaataggcctggat 617
Query: 192 taaatgtttgaaacctcaaatggcgtttgaagttagccacctgcccagggatctggacct 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 taaatgtttgaaacctcaaatggcgtttgaagttagccacctgcccagggatctggacct 557
Query: 252 ttccttacataaagggtctgcatgtacattttgccatgtagtctaggggagtttaattga 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttccttacataaagggtctgcatgtacattttgccatgtagtctaggggagtttaattga 497
Query: 312 cctgtagaattctaagatttgaagaaattctgtccctttcaccatcaatagtcacatgat 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cctgtagaattctaagatttgaagaaattctgtccctttcaccatcaatagtcacatgat 437
Query: 372 ttcccatgtcacgggaaaagaccaa 396
|||||||||||||||||||||||||
Sbjct: 436 ttcccatgtcacgggaaaagaccaa 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
