Query= MSMg01no383_k19.b1 MSMg01no383_k19.b1 CHROMAT_FILE:
MSMg01no383_k19.b1 PHD_FILE: MSMg01no383_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:46 2005
(458 letters)
>mm_chr3_133972044_133972902
Length = 859
Score = 857 bits (443), Expect = 0.0
Identities = 452/455 (99%), Gaps = 1/455 (0%)
Strand = Plus / Minus
Query: 5 gaattccatcagatatactttatggatggtattagaatgagaacaaaattaaatcatgat 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 659 gaattccatcagatatactttatggatggtattagaatgagaacaaaattaaatcatggt 600
Query: 65 ggttttcttca-ctaaatgcaagcacataaatattagtcaacattttcaaaagtatgggt 123
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 599 ggttttcttcagctaaatgcaaacacataaatattagtcaacattttcaaaagtatgggt 540
Query: 124 ccatcctataaaactatctaaaacattcctatttaatattctcaatccatatcaatattc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ccatcctataaaactatctaaaacattcctatttaatattctcaatccatatcaatattc 480
Query: 184 aactataaaattcataaggcaccataattcataatgataatgccatgctaccatatccac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aactataaaattcataaggcaccataattcataatgataatgccatgctaccatatccac 420
Query: 244 ttgtctactccttgagaactatatggatgccattattttggtgacatcattgctatgtaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ttgtctactccttgagaactatatggatgccattattttggtgacatcattgctatgtaa 360
Query: 304 aagagtataaactttttaagagaattatttgcccctacttaaatgacacattatgtcatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aagagtataaactttttaagagaattatttgcccctacttaaatgacacattatgtcatt 300
Query: 364 taactgttttgattataatataccccaaatggtcacccttcagaaagcttataatttatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 taactgttttgattataatataccccaaatggtcacccttcagaaagcttataatttatg 240
Query: 424 cttacatgaacaatatctctaatcagtatgacaat 458
|||||||||||||||||||||||||||||||||||
Sbjct: 239 cttacatgaacaatatctctaatcagtatgacaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 859
Length adjustment: 10
Effective length of query: 448
Effective length of database: 849
Effective search space: 380352
Effective search space used: 380352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_k19.g1 MSMg01no383_k19.g1 CHROMAT_FILE:
MSMg01no383_k19.g1 PHD_FILE: MSMg01no383_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:47 2005
(466 letters)
>mm_chr3_133825314_133826180
Length = 867
Score = 872 bits (451), Expect = 0.0
Identities = 463/467 (99%), Gaps = 1/467 (0%)
Strand = Plus / Plus
Query: 1 tggggggaggggggcgtctggctggttgatattgttcttcctatggggatacaaaccctt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tggggggaggggggcgtctggctggttgatattgttcttcctatgggaatacaaaccctt 260
Query: 61 cagctcaatataagaataattgagttttaaaggtaactaatattttcagttgtgatacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagctcaatataagaataattgagttttaaaggtaactaatattttcagttgtgatacca 320
Query: 121 tatattgaa-ttttttttacttttagagataaatttttatcacatgtgtatgaaatttag 179
||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 321 tatattgaatttttttttacttttagagataaattttaatcacatatgtatgaaatttag 380
Query: 180 caatataatcttagaaatgtttgtaagcttagaaagcattagcagtattcattcacttgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatataatcttagaaatgtttgtaagcttagaaagcattagcagtattcattcacttgg 440
Query: 240 gattgtatgtttaagttattcactattaataattcagtcttattccttaaggacccatcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gattgtatgtttaagttattcactattaataattcagtcttattccttaaggacccatcc 500
Query: 300 cagccagcaatggaagagctcaaatatgtgttatcatagaagcctatgtctgaatggaag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagccagcaatggaagagctcaaatatgtgttatcatagaagcctatgtctgaatggaag 560
Query: 360 ctgtggtaatcatgtcagagaatgagactggagacacaccagtgaaatggtcctctctaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtggtaatcatgtcagagaatgagactggagacacaccagtgaaatggtcctctctaa 620
Query: 420 cttttcaaaagaagtagtcaaaatttcctcagggtgttccctgaaat 466
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttttcaaaagaagtagtcaaaatttcctcagggtgttccctgaaat 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 867
Length adjustment: 10
Effective length of query: 456
Effective length of database: 857
Effective search space: 390792
Effective search space used: 390792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
