Query= MSMg01no383_o21.b1 MSMg01no383_o21.b1 CHROMAT_FILE:
MSMg01no383_o21.b1 PHD_FILE: MSMg01no383_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:06 2005
(407 letters)
>mm_chr3_58063448_58064253
Length = 806
Score = 700 bits (362), Expect = 0.0
Identities = 383/390 (98%), Gaps = 1/390 (0%)
Strand = Plus / Minus
Query: 18 ctaagccctctaccccataaaaccccctagctttcgagccttggggtcgaatccactgtc 77
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 806 ctaagccctctaccccataaaaccccctagctttcgagccttggggtagaatccactgtc 747
Query: 78 tcctgcataagttatgttttgacccggagctccatcattaaactgcctcatgtgcttaca 137
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 746 tcctgcataagttatgttttgacccagagctccatcattaaactgcctcatgtgcttaca 687
Query: 138 gcaagaaggattcttgtgtttctttgggtgcgctctctctcccgagactagagtgggggt 197
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 686 acaagaaggattcttgtgtttctttgggtgcactctctctcccgagactagagtgggggt 627
Query: 198 ccccaaaagggggtcttacactcaagacaagacctaaaactctgagactgatagaggaag 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ccccaaaagggggtcttacactcaagacaagacctaaaactctgagactgatagaggaag 567
Query: 258 cagtaggaagtgcttgcttttcatgctctgggtactagggaaggactttctccattgttc 317
|| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 566 ca-ttggaagtgcttgcttttcatgctctgggcactagggaaggactttctccattgttc 508
Query: 318 tccgaatactctgaaatgtaggccactaatcaacaagtaggactccatgaagttaaaaga 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tccgaatactctgaaatgtaggccactaatcaacaagtaggactccatgaagttaaaaga 448
Query: 378 cctggaagcaaaaaaagaaactatcggtcc 407
||||||||||||||||||||||||||||||
Sbjct: 447 cctggaagcaaaaaaagaaactatcggtcc 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 806
Length adjustment: 9
Effective length of query: 398
Effective length of database: 797
Effective search space: 317206
Effective search space used: 317206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_o21.g1 MSMg01no383_o21.g1 CHROMAT_FILE:
MSMg01no383_o21.g1 PHD_FILE: MSMg01no383_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:06 2005
(411 letters)
>mm_chr3_57862377_57863187
Length = 811
Score = 704 bits (364), Expect = 0.0
Identities = 400/412 (97%), Gaps = 3/412 (0%)
Strand = Plus / Plus
Query: 1 tcatctactgtaaagagaatgttacagagtgtggccaccgtgggattcagtattacagtt 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 tcatctactgtaaagagaatgttacagagtttggccaccgtgggattcagtattacagtt 260
Query: 61 ttccacaagatacatagaaccaccatgtattctgggaatcctccatcaggctattctcag 120
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccacgagatacatagaaccactatgtattctgggaatcctccatcaggctattctcag 320
Query: 121 gtggtcagtaagaaatctgcacgttatgcttatttcaacatttttttacagtagccaagt 180
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 321 atggtcagtaagaaatctgcacgttatgcttatttcaacattattt-acagtagccaagt 379
Query: 181 gatagaatcgacggtccaatcaccgaacaatagaa-aaactgtggcacatataaataata 239
|||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||
Sbjct: 380 gatagaatcgacggtccaatcatcgaacaatagaagaaa-tgtggcacatataaataata 438
Query: 240 gactactactcagccttaaaaatgaagggaattctgtcatctataatgcatggataatac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gactactactcagccttaaaaatgaagggaattctgtcatctataatgcatggataatac 498
Query: 300 tgactacactttgttaaatgaaacgaattaggcaggcagttgctaaacagtctcatgtta 359
|||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 499 tgactacactgtgttaaatgaaatgaactaggcaggcagttgctaaacagtctcatgtta 558
Query: 360 agagccaaaacaattgaagccatagaaacagatggtagaggggtggttcctc 411
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agagccaaaacaattgaagccatagaaacagatggtagaggggtggttcctc 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
