Query= MSMg01no384_a13.b1 MSMg01no384_a13.b1 CHROMAT_FILE:
MSMg01no384_a13.b1 PHD_FILE: MSMg01no384_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:14 2005
(226 letters)
>mm_chr3_126993209_126993838
Length = 630
Score = 346 bits (179), Expect = e-100
Identities = 214/227 (94%), Gaps = 4/227 (1%)
Strand = Plus / Minus
Query: 4 ggaattcctgcagagttgtgagacacagcttctcagggagacatctgagggacatcttcc 63
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 430 ggaattcctgcagagttgtgagacacagtttctcagagagacatctgagggacatcttcc 371
Query: 64 tcatcttcagtctgggcatcatcactgaaggataatgttttt-ttttttt---caagaag 119
||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||
Sbjct: 370 tcatcttcagtctgggcatcatcactgaaggatgctttttttatttttttctccaagaag 311
Query: 120 catataaaaaatggtatcaccatagaatcaaatataagctggtgccagaagtgggagttg 179
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 catataaaaaatggtattaccatagaatcaaatataagctggtgccagaagtgggagttg 251
Query: 180 atatgaatactagccttggttttgatctacttatccattcctaacca 226
|||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 250 atattaatactaggcttggctttgatctacttatccattcctaacca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 630
Length adjustment: 9
Effective length of query: 217
Effective length of database: 621
Effective search space: 134757
Effective search space used: 134757
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no384_a13.g1 MSMg01no384_a13.g1 CHROMAT_FILE:
MSMg01no384_a13.g1 PHD_FILE: MSMg01no384_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:14 2005
(427 letters)
>mm_chr3_126815615_126816441
Length = 827
Score = 499 bits (258), Expect = e-145
Identities = 365/424 (86%), Gaps = 46/424 (10%)
Strand = Plus / Plus
Query: 8 agaaaccctgtctcaaaaaaaaaaacaaaaaacaaaaaacaaaaaacaaaaaaagaattt 67
|||||||||||||| ||||||| ||||| ||||||| |||||||||||||
Sbjct: 219 agaaaccctgtctc-----aaaaaac--aaaac-aaaaaca------aaaaaaagaattt 264
Query: 68 gttttataaacaaataataaccaactttggtcatgg---t-gagagagagagagagagag 123
|||||||||||||||||||| ||||||||||||||| | || ||| ||| ||| |||
Sbjct: 265 gttttataaacaaataataa-caactttggtcatggagatagatagatagatagatagat 323
Query: 124 agagagagagagagcgccatgttacaacagtttgactgacactttaaaatatattggaat 183
||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agatagatagagagcgccatgatacaacagtttgactgacactttaaaatatattggaat 383
Query: 184 gaaatgcttttaatcagtgtgttaagatattatagcagattttccaagaaggacattaaa 243
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 384 gaaatgcttttaatcagtgtgttaagatattatagcagattttccaggaaggacattaaa 443
Query: 244 gtgtaccccaatgaagtacttcaggatgaggataaatggacttaaattaagcttatttcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgtaccccaatgaagtacttcaggatgaggataaatggacttaaattaagcttatttcc 503
Query: 304 ttttatgtctttcacaactcttgtgacatgaaaaaaaaaactaaaaacaaaaaacaagca 363
|||| |||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 504 ctttacgtctttcacaactcttgtgacatgaaaaaaaaaa--------aaaaaa---g-- 550
Query: 364 aaaacaaataaacacagatccaatcaagtgaaaaatgtccttaatcgatgttatatcatg 423
|||||||||||||| |||||| |||||||||||| ||||||||||||
Sbjct: 551 -------------acagatccaatcaaatgaaaa-tgtccttaatcggtgttatatcatg 596
Query: 424 ctag 427
||||
Sbjct: 597 ctag 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
