XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGTTCA
GTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTCCACC
TTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGATTTAGG
ATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATTGA
CGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATTTG
TCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTT
TTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTATAA
GTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGAATTG
ACTTGTTTGAGTTTATTTTATATCCAGCTACTTCACCGAAGCTGTTTATC
AGGTTTAGGAGTTCTCTGGTAGAATTTTTAGGGTCACTTATATATACTAT
CATATCATCTGCAAAAAGTGATATTTTGACTTCCTCTTTTCCAATTTGNA
TTCCCCTTGATCTCCTTTTGTTGTCGAATTGCTCTGGCTAATACTTCAAG
TACTATGTTGAAAAAGTAGGAAGAAAGTGGGCAGCCTTGTCTTAGCCCTG
ATTTTAATGGGAATGGTTCCAGTTTCTCTCCATTTATTTTAAGGTGGGGA
ACGGGTTGGCTGGAAAATGGTTTTATATTGTTTAGGAATTGGCCCTCGAA
TCCCTATTTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXAAATAGACATCATGGGTATAGCAGGGGAGGGGACCAGGTAT
GGGAGGTGTGGGTAAGAACAAGTGGAGATATGTCTGAGGGAGAAAATAAA
TAATGAGAGAGAGAATTTAAATCTGAAGTGCAGAAGCATCTATGTAGAGG
ATGAGCTAGAAACCAAGGGCAATGGTAACTCCCAAAAATAAATGATGATG
CTCCTAGCTAAAGCTCCTAGCAATGGGGGATATATGGTTAACTGGCCATC
TCCTGTAACCTGGAAACACTTCCAGTGGAGAGACTGAGACACCAACTGAG
CCACAAAATCTTCAACCTACAATTTTCTTGCCTACAAGATGTGATGGAGT
CGATTTGTGACTGGTCCAGCTTTAGATCCCTGGCATATGAGGAGAGGGAG
TCTACTCCTTGTACAACCCGAGGTGAGGGTGAGGTACTGGGAGGAGATCA
AGGAAGGGAAACCGAAGATAGAGAATAACATTATTAACATTAAAATTATT
TTTTCATTCAAAAAATCTGGTTTCAGAAAAAGAATTTGACCTCTTCTTTC
CCCCAATAAAAAAACTTAAACCGGGATTACCTTTCCAAATCTTGGGTGAA
CATATTTTTTTTGAAACCATTTTTTTCTCCTTCTTAAAATTAATATTGGC
TTTCCCCCTTGGCCTTATTCCCCTTGATTTTTTCCCACTTTTTTTTTATA
TTATATTTATTTTTATCCCAA

Query= MSMg01no385_e24.g1 MSMg01no385_e24.g1 CHROMAT_FILE:
MSMg01no385_e24.g1 PHD_FILE: MSMg01no385_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:51 2005
         (465 letters)



>mm_chr3_74839559_74840424
          Length = 866

 Score =  828 bits (428), Expect = 0.0
 Identities = 454/466 (97%), Gaps = 7/466 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatagacatcatgggtatagcaggggaggggaccaggtatgggaggtgtgggtaagaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aaatagacatcatgggtatagcaggggaggggaccaggtatgggaggtgtgggtaagaac 266

                                                                       
Query: 61  aagtggagatatgtctgagggagaaaataaataatgagagagagaatttaaatctgaagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagtggagatatgtctgagggagaaaataaataatgagagagagaatttaaatctgaagt 326

                                                                       
Query: 121 gcagaagcatctatgtagaggatgagctagaaaccaagggcaatggtaactcccaaaaat 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaagaagcatctatgtagaggatgagctagaaaccaagggcaatggtaactcccaaaaat 386

                                                                       
Query: 181 aaatgatgatgctcctagctaaagctcctagcaatgggggatatatggttaactggccat 240
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 387 aaatgatgatgctcctagctaaggctcctagcaatgggggatatatggttaactggccat 446

                                                                       
Query: 241 ctcctgtaacctggaaacacttccagtggagagactgagacaccaactgagccacaaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctcctgtaacctggaaacacttccagtggagagactgagacaccaactgagccacaaaat 506

                                                                       
Query: 301 cttcaacctacaattttcttgcctacaagatgtgatggagtcgatttgtgactggtccag 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 507 cttcaacctacaattttcttgcctacaagatgtgatggagtcgatttgtgactggttcag 566

                                                                       
Query: 361 ctttagatccctggcatatgaggagagggagtctactccttgtacaaccc-gaggtgagg 419
                 |||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 567 ------atccctggcatatgaggagagggagtctactccttgtacaacccagaggtaagg 620

                                                         
Query: 420 gtgaggtactgggaggagatcaaggaagggaaaccgaagatagaga 465
           |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 gtgaggtactgggaggagatcaaggaagggaaactgaagatagaga 666


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 866
Length adjustment: 10
Effective length of query: 455
Effective length of database: 856
Effective search space:   389480
Effective search space used:   389480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)