Query= MSMg01no385_o20.b1 MSMg01no385_o20.b1 CHROMAT_FILE:
MSMg01no385_o20.b1 PHD_FILE: MSMg01no385_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:38 2005
(447 letters)
>mm_chr3_130346309_130347154
Length = 846
Score = 833 bits (431), Expect = 0.0
Identities = 443/447 (99%), Gaps = 1/447 (0%)
Strand = Plus / Minus
Query: 1 aatacttgctttcattactgcttctggaaaagatgccatctccactcgccaaattaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 491 aatacttgctttcattactgcttctggaaaagatgccatctccactcgccaaa-taattc 433
Query: 61 ctcatttctccaatgaccaatgactgacatgtacctggatctgcttctgaattctttatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctcatttctccaatgaccaatgactgacatgtacctggatctgcttctgaattctttatc 373
Query: 121 ccatcccactggtgaactggtctacccttgtggtaggccaatactccgttagtggctaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ccatcccactggtgaactggtctacccttgtggtaggccaatactccgttagtggctaga 313
Query: 181 gctaagtcttggtttctactcaggtatttttctctcgtttttctttacttctgaaatgct 240
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 312 gctaagtctcggtttctactcaggtatttttctctcatttttctttacttctgaaatgct 253
Query: 241 gagtgagaatcttgataacttagttacatttcttgctgtttctgacacctgatatgttag 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gagtgagaatcttgatgacttagttacatttcttgctgtttctgacacctgatatgttag 193
Query: 301 ttatttttccactaactgtaacaaaatgctcaacaaaagttgcttacagaaaaagtaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ttatttttccactaactgtaacaaaatgctcaacaaaagttgcttacagaaaaagtaagc 133
Query: 361 atctggttggcttatggtttaaaaggatacattttgtcatggtaggatagtcatagcagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atctggttggcttatggtttaaaaggatacattttgtcatggtaggatagtcatagcagc 73
Query: 421 agatggtaaggcggctggccacaggat 447
|||||||||||||||||||||||||||
Sbjct: 72 agatggtaaggcggctggccacaggat 46
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 846
Length adjustment: 10
Effective length of query: 437
Effective length of database: 836
Effective search space: 365332
Effective search space used: 365332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_o20.g1 MSMg01no385_o20.g1 CHROMAT_FILE:
MSMg01no385_o20.g1 PHD_FILE: MSMg01no385_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:38 2005
(434 letters)
>mm_chr3_130190701_130191534
Length = 834
Score = 777 bits (402), Expect = 0.0
Identities = 426/434 (98%)
Strand = Plus / Plus
Query: 1 attcaacggtatttatgataaacactacttcaagtatcaaagatgtaaaatctgtaatct 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcaacagtatttatgataaacactacttcaagtatcaaagatgtaaaatctgtaatct 260
Query: 61 gaggatgcttttactgagttgagtggattttaatatctaaatatattaaagtataattcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 gaggatgcttttactgagttgagtggattttaatatctaaatatattaaagtataatccg 320
Query: 121 tcaaaatgtggtgggacgagacagaagacaacttgtgtctaggcatcttggagaaatgag 180
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 321 tcaaaatgtggtgggacgagacagaagacaacatgtgtctaggcatcttggagaggtgag 380
Query: 181 tcatgcccctcagacctggaagagtgattaagaaattcaactaaaggctaacaggagaag 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 381 tcatgcccctcagacctggaagagtgattaagaaattcaactgaaggctaacaggaggag 440
Query: 241 gaaatgaacttcatgcgagtataaatgaagatggctgaagacgggtcccaggaaaggctt 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacatgaacttcatgcgagtataaatgaagatggctgaagacgggtcccaggaaaggctt 500
Query: 301 ggtatatgtagcactgagacatagcactgaagtccaggatttttccatagcctctacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtatatgtagcactgagacatagcactgaagtccaggatttttccatagcctctacaaa 560
Query: 361 acaatttgcatagaagcaccacagcagcaatgccttgcatcctatacttttcccaatagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaatttgcatagaagcaccacagcagcaatgccttgcatcctatacttttcccaatagt 620
Query: 421 ttctgtctgggtgt 434
||||||||||||||
Sbjct: 621 ttctgtctgggtgt 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
