CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGCCCCACTATTATGATTTACTGTCTGTTAATTCCTCTTAATCA
GAATAAAGTGTTTTGAAAATGAACTGAATATTATTATATTTATTCCTATG
TTCTTCTGTCATACTTGTATTCTGAGTTAGTGTAGTGAATATAATTTTAA
CTAACTAATTATAAGAAAAAAATAGAGATCGAGTCATTCAGAATTAGTTT
TGCCTTGATCATAACAATCTCTGAGTAAGTGACATCATGAATAAATATGT
ATTTTGACACAAGCACAGACTATTTGCCTCTGACAGACTCCAGGAACAAT
TGGCTGATGGAAAATTGGCATAGCTTAAGAGGGATGACAAAGCTTTCTTC
TAGAGTCAAAGTATGAGTGTGTGTGGATAAATGATCAGTGCATGTAAAGA
CAAACACTAAGGCCTGCTGCTCCTGGATCTTTATACATAGAGACTACTGT
CCTACATAGACCTTGTTCCCCAATGAGTTAATTTACCCCTACCCTCTCAA
TGTTGCATCTACAAAGCTACTGAGATGCTAGGTTGTAGTGTTTTAGGTTA
GAGAAATCTACCTGATAGCAGCTTCAATGAACAAAAACAAATGTTGATGC
AAGTATGGTTGTTTTGTAAGTTTCTGGACTTCAGAAGAAGACAGGAAGGG
AGGAAGGAAAAAC

NTTCTCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAA
TGGCAGAGAAGCACCTGAAAAAATGCTCAACATCCTTAATCATCAGGGAA
ATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATAGC
TAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAA
GAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTC
TGGAGATCAGTCTGGCGGTTCCTCATTATATTGGATATAGTACTACCGGA
GGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTG
GTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATA
GCCAGAAGCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACA
GAAGATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGA
ATGAATTTATGAAATTCCTGGCCAAATGGATGGACCTGGAGGGCATCATC
CTGAGTGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACT
GATAAGTGGATATTAGCCCAAAACCTAAGATACCCAAGATATAAGATACT
ATTN

Query= MSMg01no386_e02.b1 MSMg01no386_e02.b1 CHROMAT_FILE:
MSMg01no386_e02.b1 PHD_FILE: MSMg01no386_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:02 2005
         (641 letters)



>mm_chr3_72686838_72687878
          Length = 1041

 Score = 1141 bits (590), Expect = 0.0
 Identities = 626/638 (98%), Gaps = 2/638 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttgccccactattatgatttactgtctgttaattcctcttaatcagaataaag 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgccccaatattatgatttactgtctgttaattcctcttaatcagaataaag 264

                                                                       
Query: 65  tgttttgaaaatgaactgaatattattatatttattcctatgttcttctgtcatacttgt 124
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 265 tgttttgaaaatgaactgaatattattatatttattcctatgttcttctgtcgtacttgt 324

                                                                       
Query: 125 attctgagttagtgtagtgaatataattttaactaactaattataagaaaaaaat-agag 183
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 325 attctgagttactgtagtgaatataattttaactaactaattataagaaaaaaaagagag 384

                                                                       
Query: 184 atcgagtcattcagaattagttttgccttgatcataacaatctctgagtaagtgacatca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atcgagtcattcagaattagttttgccttgatcataacaatctctgagtaagtgacatca 444

                                                                       
Query: 244 tgaataaatatgtattttgacacaagcacagactatttgcctctgacagactccaggaac 303
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgaatgaatatgtattttgacacaagcacagactatttgcctctgacagactccaggaac 504

                                                                       
Query: 304 aattggctgatggaaaattggcatagcttaagagggatgacaaagctttcttctagagtc 363
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 505 aattggctgatggaaaattggcatagcttaagagggatgacaaag-tttcttctagagtc 563

                                                                       
Query: 364 aaagtatgagtgtgtgtggataaatgatcagtgcatgtaaagacaaacactaaggcctgc 423
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 564 aaagtatgagtgtgtgtggataaatgatcagtgcatgtaaagactaacactaaggcctgc 623

                                                                       
Query: 424 tgctcctggatctttatacatagagactactgtcctacatagaccttgttccccaatgag 483
           |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 624 tgctcctggatctttatatatagagactgctgtcctacatagaccttgttccccaatgag 683

                                                                       
Query: 484 ttaatttacccctaccctctcaatgttgcatctacaaagctactgagatgctaggttgta 543
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 684 ttaatttacccctaccctctcaatgttgcatctacaaaactactgagatgctaggttgta 743

                                                                       
Query: 544 gtgttttaggttagagaaatctacctgatagcagcttcaatgaacaaaaacaaatgttga 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gtgttttaggttagagaaatctacctgatagcagcttcaatgaacaaaaacaaatgttga 803

                                                 
Query: 604 tgcaagtatggttgttttgtaagtttctggacttcaga 641
           |||||||||||||||||||| |||||||||||||||||
Sbjct: 804 tgcaagtatggttgttttgttagtttctggacttcaga 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)