CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCCTGAGGTCCGCGG
AATTCCAAGTGATTGCCAATAATCTCCCTGCTGATATTTCCCCCCATTTC
AGTTAGAAAACATTGATGTTTCATAAGATGTTTTTACGCTTACAATGTTG
TTAAATTATGGGCCTAAGTTATATGTTTCATTGGGATGTCTAACAATTTG
AATTTTTCCCTTTAATTCTGGTAACCATTATATCTTAAAACTCTCTTTGT
GTAATTGTTAATTTTGAATAACAGCATAAAGGGATCTAGCTTTGGCTAAG
GGACTCACTCTGGGCATGTCTTTTTTGTTTCTTGCCCCATGATACCTTTA
TTCTATGTCATTCCTAAAATTCCATGACTTGTCTAGACTAACTTCCTTTG
CCGAAATTTTCTTGTAAGACAGCTGTTGGATTTAAACAAAACTAAGCTGT
CAATTTCTAGAAATTTGAACAACACCCCAAAATAAAGATTTATCAAGCTT
ATCTTCCTGATAATTTTCCTAAACCTCTAAGGAGATACAGTGCCTGGTTT
TGCTATTTAACCATGTGTGCCCTTGCTCATGATTTAGTCCCAACCACAGT
ATAAATTCTTTAATGAAAGAGTCAATTGCTTCATTTCAAGATAACAGATT
TGTACAATGCTTTACAGATTCTTTGGGCAGGGCAAATGCCAGTTGCATGG
TATGTAAGAAGAAATTTGAAAAAGACCTATAGACCTTAA

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAACACTGCAGGATCCTGAAGGCAGGAGCTG
ATGCAGAGGCCACAGAGGAGTGCTTCTTACTGGTTTGCTTCTCCTGACTT
GTTCAGCCTGCTGTCCTATAAAACCCAGGACCACATCCCTGAGATGGCAG
CACTCACAGTGGGCCCTCTTGCACTGATAACTAAATGAGATAATGCCCTA
GAGATGTATCTCATGGAGCATCTCCTTAACTGATGCTCCTTTCTCTCTGA
CGACTTTAGATTGTGATTTTCACAAAACCAGCCAGTACAACAAATCTAAA
TCTGTAATAGCCAGGGTTCTTTAAAGACATAGAACTTGGCACAAGTCCCT
TCCGCTCGACTCGAGACTCGAGCCCCGGGCTACCTTGCCAGCAGAGTCTT
GCCCAACACCCGCAAGGGCCCACACGGGACTCCCCACGGGACCCTAAGAC
CTCTGGTGAGTGGACCACAGTGCCTGCCCAAATCCAATCACGTGGAACTT
GAGACTGCGGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGGGGCAC
AAGTCCCTTCCGCTCGACTCGAGACTCGAGCCCCGGGCTACCTTGCCAGC
AGAGTCTTGCCCAACACCCGCAAGGGCCCACACGGGACTCCCCACGTTAC
CCTAAGACCTCTGGTGAGTGGAACACAACTTCTGC

Query= MSMg01no386_f05.b1 MSMg01no386_f05.b1 CHROMAT_FILE:
MSMg01no386_f05.b1 PHD_FILE: MSMg01no386_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:07 2005
         (513 letters)



>mm_chr3_150408999_150409913
          Length = 915

 Score =  938 bits (485), Expect = 0.0
 Identities = 507/519 (97%), Gaps = 10/519 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctccctgctgatatttccccccatttcagttagaaaacattgatgtttcataagatgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctccctgctgatatttccccccatttcagttagaaaacattgatgtttcataagatgtt 260

                                                                       
Query: 61  tttacgcttacaatgttgttaaattatgggcctaagttatatgtttcattgggatgtcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttacgcttacaatgttgttaaattatgggcctaagttatatgtttcattgggatgtcta 320

                                                                       
Query: 121 acaatttgaatttttccctttaattctggtaaccattatatcttaaaactctctttgtgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaatttgaatttttccctttaattctggtaaccattatatcttaaaactctctttgtgt 380

                                                                       
Query: 181 aattgttaattttgaataacagcataaagggatctagctttggctaagggactcactctg 240
           ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 aattgttaattttgagtaacagcataaagggatttagctttggctaagggactcactctg 440

                                                                       
Query: 241 ggcatgtct-----tttttgtttcttgccccatgatacctttattctatgtcattcctaa 295
           |||||||||     |    |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcatgtctacacat----gtttcttgccccatgatacctttattctatgtcattcctaa 496

                                                                       
Query: 296 aattccatgacttgtctagactaacttcctttgccgaaattttcttgtaagacagctgtt 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aattccatgacttgtctagactaacttcctttgccgaaattttcttgtaagacagctgtt 556

                                                                       
Query: 356 ggatttaaacaaaactaagctgtcaatttctagaaatttgaacaacaccccaaaataaag 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggatttaaacaaaactaagctgtcaatttctagaaatttgaacaacaccccaaaataaag 616

                                                                       
Query: 416 atttatcaagcttatcttcctgataattttcctaaacctctaaggagatacagtgcctgg 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atttatcaagcttatcttcctgataattttcctaaacctctaaggagatacagtgcctgg 676

                                                  
Query: 476 ttttgctatttaaccatgtgtgccc-ttgctcatgattt 513
           ||||||||||||||||||||||||| |||||||||||||
Sbjct: 677 ttttgctatttaaccatgtgtgccccttgctcatgattt 715


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 915
Length adjustment: 10
Effective length of query: 503
Effective length of database: 905
Effective search space:   455215
Effective search space used:   455215
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)