Query= MSMg01no388_i23.b1 MSMg01no388_i23.b1 CHROMAT_FILE:
MSMg01no388_i23.b1 PHD_FILE: MSMg01no388_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:55 2005
(465 letters)
>mm_chr3_110499024_110499888
Length = 865
Score = 812 bits (420), Expect = 0.0
Identities = 453/464 (97%), Gaps = 3/464 (0%)
Strand = Plus / Minus
Query: 4 gaattctaagaaaaatatttt-ttt-aattactaagaaggggccagtaaaatatcaagaa 61
|||||||||| ||||| |||| ||| ||||||||||||||||| ||||||||||||||||
Sbjct: 797 gaattctaag-aaaatgttttgtttaaattactaagaaggggctagtaaaatatcaagaa 739
Query: 62 tatttgaatataagctagaggaatataaagaaatacatacaaattatatatgtatataca 121
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 738 tatttgaatataagctagaggaatataaaggaatacatacaaagtatatatgtatataca 679
Query: 122 tatatatacatatcattgtaatgaaatcatgtgtgaacacatgtttacaaatatacatga 181
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tatatataaatatcattgtaatgaaatcatgtgtgaacacatgtttacaaatatacatga 619
Query: 182 aagaggaaaatgtgccaatgtattctggatttgcaaacctccatactcctataaggctaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aagaggaaaatgtgccaatgtattctggatttgcaaacctccatactcctataaggctaa 559
Query: 242 aggatagatgaatagcaaaacccaggcttaccattagtatgaaatggaaataaattctat 301
|||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 558 aggatagatgaatagcaaaacccaggtttaccattagtatggaatggaaataagttctat 499
Query: 302 gcttacaggtgaataaaaggagaattttaagatcctatgtgtacaaatggtgtaagcaac 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gcttacaggtgaataaaaggagaattttaagatcctatgtgtacaaatggtgtaagcaac 439
Query: 362 tactttttaaggagtaaactttgaagataatagaagtaaataaagttttgatacacaagg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tactttttaaggagtaaactttgaagataatagaagtaaataaagttttgatacacaagg 379
Query: 422 ctaaatttagaagccttgagaattatatgtatgacttgatgtct 465
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctaaatttagaagccttgagaattatatgtatgacttgatgtct 335
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_i23.g1 MSMg01no388_i23.g1 CHROMAT_FILE:
MSMg01no388_i23.g1 PHD_FILE: MSMg01no388_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:55 2005
(439 letters)
>mm_chr3_110336975_110337813
Length = 839
Score = 756 bits (391), Expect = 0.0
Identities = 427/443 (96%), Gaps = 8/443 (1%)
Strand = Plus / Plus
Query: 1 aaggtaaggaaggttaagtgaaggacttagggaaggagcatgtgggaacatagacaaaag 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggtaaggagggttaagtgaaggacttagggaaggagcatgtgggaacatagacaaaag 260
Query: 61 acaaaagcagtctgagtgcctgggagcagcatgaacaaaggatcttgagttgataaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaaagcagtctgagtgcctgggagcagcatgaacaaaggatcttgagttgataaagct 320
Query: 121 cttactgatttcaagaagaaactaggtggtcaaggtggcttcaaatattttcacaagggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttactgatttcaagaagaaactaggtggtcaaggtggcttcaaatattttcacaagggg 380
Query: 181 gagaaagattgcagagtgattctgcctagatttcggggattttgacttttactctaggaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 gagaaagattgcagagtgattctgcctagatttcggggattttgacttttactccaggaa 440
Query: 241 aaactttt----gtatttagtgattcaggattctacttgctctttgcatctgtagcagag 296
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaac----aggggtatttagtgattcaggattctacttgctctttgcatctgtagcagag 496
Query: 297 gatggcctaaactggcatcagtggaagcagagccccttggtcctgcagagggttcatact 356
|||||||| ||||||||||||||||||| |||||||||||||||| ||||| ||||||||
Sbjct: 497 gatggccttaactggcatcagtggaagcggagccccttggtcctgtagaggattcatact 556
Query: 357 ccagcttaggggaatgctagactggtgaggcaggagtgagtgggtaggggagctccctca 416
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 557 ccagcttaggggaatgctagagtggtgaggcaagagtgagtgggtaggggagctccctca 616
Query: 417 gaaaagcagagtggagagggaat 439
|||||||||||||||||||||||
Sbjct: 617 gaaaagcagagtggagagggaat 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
