Query= MSMg01no389_d09.b1 MSMg01no389_d09.b1 CHROMAT_FILE:
MSMg01no389_d09.b1 PHD_FILE: MSMg01no389_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:44 2005
(292 letters)
>mm_chr3_32611311_32612002
Length = 692
Score = 495 bits (256), Expect = e-144
Identities = 283/292 (96%)
Strand = Plus / Plus
Query: 1 gcttgtgtaatgagatgggagttgtgagggaactatctttgaaatgctttacagatgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcttgtgtaatgagatgggagttgtgagggaactatctttgaaatgctttacagatgtgg 260
Query: 61 ctgcggcattgtgtgtgttaggtcacttgcaggaaaggtaggcagagaatgcggtcttcc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgcggcattgtttgtgttaggtcacttgcaggaaaggtaggcagagaatgcggtcttcc 320
Query: 121 tctggagcatgctgaaatagtcgctgaaagctggcctgtgggaattatgtaaggctcagt 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctggagcatgctgaaatagtcactgaaagctggcctgtgggaattatgtaaggctcagt 380
Query: 181 gtgctccgtcatctttgccactctgaaagacttgctgacagtacgtattatctgctggag 240
|||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 gtgctctgtcatctttgccactctgaaagacttgctgacagtacgtagaatctgctggag 440
Query: 241 ggatgcattggagacagggcagtaataaaagaggacaaggtttctgatgaga 292
||||||| || ||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 441 ggatgcactgtagacaggacagtaataaaagaggagaaggtttctgatgaga 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no389_d09.g1 MSMg01no389_d09.g1 CHROMAT_FILE:
MSMg01no389_d09.g1 PHD_FILE: MSMg01no389_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:44 2005
(463 letters)
>mm_chr3_32799921_32800783
Length = 863
Score = 592 bits (306), Expect = e-173
Identities = 321/326 (98%), Gaps = 1/326 (0%)
Strand = Plus / Minus
Query: 1 ttcatgacttccatgtgattcagctcagttgcattggaagtgggattgcttgagtggtac 60
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 ttcacgacttccatgtgattcagctcagttgcattagaagtgggattgcttgagtggtac 266
Query: 61 ctgggtatcaagtacctggaggggctctcaatgggctctgtccagagaccaaacactgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgggtatcaagtacctggaggggctctcaatgggctctgtccagagaccaaacactgct 206
Query: 121 ggaagttagtctggtgtggtgtataacgaatgctaaattttgaaccccaagatctggttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaagttagtctggtgtggtgtataacgaatgctaaattttgaaccccaagatctggttg 146
Query: 181 cccccagacaagtgaattctcgggtacaccagctccccaatttgctgtgtaaacattgct 240
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 145 -ccccagacaagtgaattctcaggtacaccagctccccaatttgctgtgtaaacattgct 87
Query: 241 ccccaattttatacaaaagggagagaagaagaagaaagaggagaaagaggagggagagag 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 ccccaattttagacaaaagggagagaagaagaagaaagaggagaaagaggagggagagag 27
Query: 301 caggtctccattagatatgatgggcc 326
||||||||||||||||||||||||||
Sbjct: 26 caggtctccattagatatgatgggcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
