Query= MSMg01no389_m03.b1 MSMg01no389_m03.b1 CHROMAT_FILE:
MSMg01no389_m03.b1 PHD_FILE: MSMg01no389_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:28 2005
(204 letters)
>mm_chr3_124060786_124061390
Length = 605
Score = 389 bits (201), Expect = e-113
Identities = 204/205 (99%), Gaps = 1/205 (0%)
Strand = Plus / Plus
Query: 1 tttcatacaaagatataaaatcctaattcatcagggaaaatagctatcaagtgcatactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcatacaaagatataaaatcctaattcatcagggaaaatagctatcaagtgcatactg 260
Query: 61 atcatattcaatgatataaaactattttaaaagaactctaatgccattttacagtgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcatattcaatgatataaaactattttaaaagaactctaatgccattttacagtgaaaa 320
Query: 121 accttcacacaaatcatttttttt-ctgtttttatatggtattatttttttaatttattt 179
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 accttcacacaaatcatttttttttctgtttttatatggtattatttttttaatttattt 380
Query: 180 tttaattaggtattttcttcattta 204
|||||||||||||||||||||||||
Sbjct: 381 tttaattaggtattttcttcattta 405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 605
Length adjustment: 8
Effective length of query: 196
Effective length of database: 597
Effective search space: 117012
Effective search space used: 117012
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no389_m03.g1 MSMg01no389_m03.g1 CHROMAT_FILE:
MSMg01no389_m03.g1 PHD_FILE: MSMg01no389_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:28 2005
(563 letters)
>mm_chr3_124233722_124234684
Length = 963
Score = 1089 bits (563), Expect = 0.0
Identities = 563/563 (100%)
Strand = Plus / Minus
Query: 1 tacttcttataactttgagtacaaactcaatatttctccaacaaaactaaacacaatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tacttcttataactttgagtacaaactcaatatttctccaacaaaactaaacacaatgca 704
Query: 61 tgaatcttgggtaaaatcaggatttggaaaaatgacatgaacacattgttaaaactggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tgaatcttgggtaaaatcaggatttggaaaaatgacatgaacacattgttaaaactggta 644
Query: 121 aatttgcctgaggactatatataatttagtgtcaatttatccctgacaaatgtagagact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 aatttgcctgaggactatatataatttagtgtcaatttatccctgacaaatgtagagact 584
Query: 181 ggtaattgatagttgttatttaagaaaacatttgtttaccaagatgaatacatgtatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ggtaattgatagttgttatttaagaaaacatttgtttaccaagatgaatacatgtatttt 524
Query: 241 taattaaaggcatgtggatgactattgagtctagatgaaatggtaatggtattctttata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 taattaaaggcatgtggatgactattgagtctagatgaaatggtaatggtattctttata 464
Query: 301 tttttacttttaatttatgtatttaacaatttccaaatgtaatctagaaattagtccccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tttttacttttaatttatgtatttaacaatttccaaatgtaatctagaaattagtccccc 404
Query: 361 tgacatgcattaccttttctgctctacctccttcttcttagcacaggcagagctgttcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tgacatgcattaccttttctgctctacctccttcttcttagcacaggcagagctgttcat 344
Query: 421 atgtttatattttatatactactacttcctatctctgtcatagaaattaaattcccaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atgtttatattttatatactactacttcctatctctgtcatagaaattaaattcccaagg 284
Query: 481 gcattgagacgtaaatcattttaattctagaatttagaatatgactttaagagaagcaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gcattgagacgtaaatcattttaattctagaatttagaatatgactttaagagaagcaag 224
Query: 541 tattgaaaatgttgtttcactct 563
|||||||||||||||||||||||
Sbjct: 223 tattgaaaatgttgtttcactct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
