Query= MSMg01no390_h22.b1 MSMg01no390_h22.b1 CHROMAT_FILE:
MSMg01no390_h22.b1 PHD_FILE: MSMg01no390_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:25 2005
(416 letters)
>mm_chr3_152861855_152862666
Length = 812
Score = 710 bits (367), Expect = 0.0
Identities = 388/397 (97%), Gaps = 4/397 (1%)
Strand = Plus / Minus
Query: 16 aacatggtctgttccggcagtgaaggtaccaagagcagcttggcccatggtggcgaatgg 75
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 aacatgatctgtcccggcagtgaaggtaccaagagcagcttggcccatggtggcgaatgg 753
Query: 76 gcagcagagaagaggaagtcaggctcagctggcttttctcctgacacctcagcgcatgga 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gcagcagagaagaggaagtcaggctcagctggcttttctcctgacacctcagcgcatgga 693
Query: 136 atggtgctgcccacgttcaggctgggtctttcctcctaagaacacctctctctctgggaa 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 atggtgctgcccacgttcaggctgggtctttcctcctaagaacacctctctctctgggaa 633
Query: 196 cacccttgccagcagagtcatgccttgttaatgccatcagtgttccttacgccaatcctt 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cacccttgccagcagagtcatgccttgttaatgccatcagtgttccttacgccaatccag 573
Query: 256 ctggcactcagaattgattatcatgctgcctggggctgggctcttgctctgcaggcttat 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ctggcactcagaattgattatcatgctgcctggggctgggctcttgctctgcaggcttat 513
Query: 316 taacagcgtcaggttagtgcccaggctgcttcaattgcacactttcttctgccttcctca 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 taacagcgtcaggttagtgcccaggctgcttcaattgcacactttcttctgccttcctca 453
Query: 376 ctccgatatatatctcttgctgcctcttctttcgttt 412
||||| |||||| |||||||||||||||||||||
Sbjct: 452 ctccg----atatcttttgctgcctcttctttcgttt 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 812
Length adjustment: 9
Effective length of query: 407
Effective length of database: 803
Effective search space: 326821
Effective search space used: 326821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_h22.g1 MSMg01no390_h22.g1 CHROMAT_FILE:
MSMg01no390_h22.g1 PHD_FILE: MSMg01no390_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:26 2005
(458 letters)
>mm_chr3_152707678_152708535
Length = 858
Score = 855 bits (442), Expect = 0.0
Identities = 454/458 (99%)
Strand = Plus / Plus
Query: 1 catccacagtggtttatctgggttatctccccgtgagtctgtaggctgctcccttcactc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 catccacagtggtttatctgggttatctcccggtgagtctgtaggctgctcccttcactc 260
Query: 61 ttagccttctctcctgtaccagagtgacctacctgtgaaccagagctgagagtctattcc 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagccttctctcccgtaccagagtgacctacctgtgaaccagagctgagagtctattcc 320
Query: 121 acatcacaagtgggtcatgagtgatctcccatggggctcaaggtgttgaagagtgactgg 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 acatcacaagtgggtcatgagtgatctcccatggggcccaaggtgttgaagagtgactgg 380
Query: 181 taaaggattcatgctgatgcaaaagagtagctgggaagccacgggccttccggcttcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaggattcatgctgatgcaaaagagtagctgggaagccacgggccttccggcttcttg 440
Query: 241 aaccacttctaatttaaggtggattgctgctgagcccatccagttttatgagctggggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaccacttctaatttaaggtggattgctgctgagcccatccagttttatgagctggggag 500
Query: 301 tctgagggagcccaggtcatggtgagcagttcataccatgtggtcacttgttgccccgtg 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 tctgagggagcccaggtcatggtgagcagttcacaccatgtggtcacttgttgccccgtg 560
Query: 361 ggctgtctccttcacaaagccctaggcaagactgcaagcatatctttccaagttagtgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggctgtctccttcacaaagccctaggcaagactgcaagcatatctttccaagttagtgca 620
Query: 421 gctatttctgatcctctttcctgatagcgatggaagag 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctatttctgatcctctttcctgatagcgatggaagag 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
