Query= MSMg01no392_e03.b1 MSMg01no392_e03.b1 CHROMAT_FILE:
MSMg01no392_e03.b1 PHD_FILE: MSMg01no392_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:43 2005
(310 letters)
>mm_chr3_145953889_145954598
Length = 710
Score = 584 bits (302), Expect = e-171
Identities = 308/310 (99%)
Strand = Plus / Plus
Query: 1 agtgagtgaatacagacacagtgacaggctggaaaatcggaccctgaggattctcagtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgagtgaatacagacacagtgacaggctggaaaatcggaccctgaggattctcagtgt 260
Query: 61 ctgaaagacagagaaacaagaagtcaatcaaggagacagaaggcaaagcccgtgctgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaaagacagagaaacaagaagtcaatcaaggagacagaaggcaaagcccgtgctgaag 320
Query: 121 gaaaagatccagaaatccacagagagcgaataactgtgtcaaagactctgaggtaaggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaaagatccagaaatccacagagagcgaataactgtgtcaaagactctgaggtaaggct 380
Query: 181 tgaagtttcgctgttaatttggccttagaagttatgaggacgttgacaccggagtttcag 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tgaagtttcgctgttaatttggccttagaagttatgagggcgttgacaccggagtttcag 440
Query: 241 tggcgtggtggggatgagagccagcttgaaatgggttcaaaggaaaatgggaggtgaggt 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggcatggtggggatgagagccagcttgaaatgggttcaaaggaaaatgggaggtgaggt 500
Query: 301 ttggaagcag 310
||||||||||
Sbjct: 501 ttggaagcag 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_e03.g1 MSMg01no392_e03.g1 CHROMAT_FILE:
MSMg01no392_e03.g1 PHD_FILE: MSMg01no392_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:43 2005
(240 letters)
>mm_chr3_146119174_146119814
Length = 641
Score = 427 bits (221), Expect = e-124
Identities = 236/241 (97%), Gaps = 1/241 (0%)
Strand = Plus / Minus
Query: 1 cactgaacactgctaatcacttgctgtcatcccagtcaaagccacgcatctccttcccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cactgaacactgctaatcacttgctgtcatcccagtcaaagccacgcatctccttcccac 382
Query: 61 tgatatgtgcatccttgtgtcatataatttgaccagtgagtctcatgtgacaaccagctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatatgtgcatccttgtgtcatataatttgaccagtgagtctcatgtgacaaccagctc 322
Query: 121 tctcagaatcactcaacgcacatgctaaaactgcatgtgc-tcagctctagcccacaatc 179
|||||||||||| |||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 321 tctcagaatcacccaacgcacatgctaaaactgcaggtccctcagctctagcccacaatc 262
Query: 180 agtgaaccaatgtcaggaaattctaaataacaccgcacgtgatcccagggcaagcttcag 239
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 agtgaaccaatgtcaggaaattctaaataacaccgtacgtgatcccagggcaagcttcag 202
Query: 240 a 240
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 641
Length adjustment: 9
Effective length of query: 231
Effective length of database: 632
Effective search space: 145992
Effective search space used: 145992
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
