MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-393J18
Chromosome	3 (Build37)
Map Location	132,984,669 - 132,985,125
singlet/doublet	singlet
Overlap gene	Ppa2
Upstream gene	LOC100039018, EG433653, LOC668857, Scye1, A630047E20Rik, LOC668858, Npnt, Gstcd, Ints12, 9130221D24Rik
Downstream gene	E130014J05Rik, EG620205, LOC100039168, LOC668862, LOC100039199, Cxxc4
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039018 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	EG433653 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433653 MGI:3647547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins

name	LOC668857 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Scye1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13722 MGI:102774
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A630047E20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271981 MGI:2445052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668858 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668858
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins pseudo : _no_value

name	Npnt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114249 MGI:2148811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gstcd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67553 MGI:1914803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ints12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71793 MGI:1919043
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9130221D24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77669 MGI:1924919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74776 MGI:1922026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E130014J05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214133 MGI:2443298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG620205 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620205 MGI:3643755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100039168 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC668862 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039199 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039199
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Cxxc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319478 MGI:2442112
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039018 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251934 GeneID:100039018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001472097.1

name	EG433653 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369925 GeneID:433653 MGI:3647547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins product : predicted gene, EG433653 transcript_id : XM_485313.3

name	Scye1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126012516 GeneID:13722 MGI:102774
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : small inducible cytokine subfamily E, member 1 transcript_id : NM_007926.2

name	A630047E20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801858 GeneID:271981 MGI:2445052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A630047E20 gene transcript_id : NM_173032.2

name	Npnt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71067127 GeneID:114249 MGI:2148811
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nephronectin transcript_id : NM_001029836.1

name	Npnt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:73088939 GeneID:114249 MGI:2148811
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nephronectin transcript_id : NM_033525.2

name	Gstcd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55926230 GeneID:67553 MGI:1914803
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutathione S-transferase, C-terminal domain containing transcript_id : NM_026231.2

name	Ints12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55742883 GeneID:71793 MGI:1919043
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrator complex subunit 12 transcript_id : NM_027927.3

name	9130221D24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037496 GeneID:77669 MGI:1924919
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9130221D24 gene transcript_id : NM_029953.1

name	Ppa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22203752 GeneID:74776 MGI:1922026
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pyrophosphatase (inorganic) 2 transcript_id : NM_146141.1

name	E130014J05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94536720 GeneID:214133 MGI:2443298
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E130014J05 gene transcript_id : NM_001040400.1

name	EG620205 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369930 GeneID:620205 MGI:3643755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : predicted gene, EG620205 transcript_id : XM_895691.2

name	LOC100039168 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251937 GeneID:100039168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039168 transcript_id : XM_001472385.1

name	LOC100039199 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251939 GeneID:100039199
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039199 transcript_id : XM_001472437.1

name	Cxxc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52345427 GeneID:319478 MGI:2442112
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CXXC finger 4 transcript_id : NM_001004367.2

name	LOC100039018 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251935 GeneID:100039018
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472147.1

name	EG433653 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369926 GeneID:433653 MGI:3647547
definition	codon_start : 1 product : similar to hCG2036814 protein_id : XP_485313.2

name	Scye1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126012517 GeneID:13722 MGI:102774
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase (ATP-hydrolyzing) activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA] GO_process : GO:0006265 - DNA topological change [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 note : endothelial monocyte activating polypeptide 2 product : small inducible cytokine subfamily E, member 1 protein_id : NP_031952.2

name	A630047E20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370550 GeneID:271981 MGI:2445052
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC271981 protein_id : NP_766620.1

name	Npnt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71067128 CCDS:CCDS17845.1 GeneID:114249 MGI:2148811
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IPI] [Evidence IDA] GO_function : GO:0005178 - integrin binding [Evidence IPI] GO_process : GO:0007160 - cell-matrix adhesion [Evidence IPI] [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : nephronectin isoform b protein_id : NP_001025007.1

name	Npnt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:73088940 CCDS:CCDS17846.1 GeneID:114249 MGI:2148811
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IPI] [Evidence IDA] GO_function : GO:0005178 - integrin binding [Evidence IPI] GO_process : GO:0007160 - cell-matrix adhesion [Evidence IPI] [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : nephronectin isoform a protein_id : NP_277060.2

name	Gstcd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55926231 CCDS:CCDS17847.1 GeneID:67553 MGI:1914803
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : glutathione S-transferase, C-terminal domain containing protein_id : NP_080507.2

name	Ints12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313674 CCDS:CCDS17848.1 GeneID:71793 MGI:1919043
definition	GO_component : GO:0032039 - integrator complex [Evidence ISS] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0016180 - snRNA processing [Evidence ISS] codon_start : 1 product : PHD finger protein 22 protein_id : NP_082203.1

name	9130221D24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037497 CCDS:CCDS17849.1 GeneID:77669 MGI:1924919
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 product : hypothetical protein LOC77669 protein_id : NP_084229.1

name	Ppa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22203753 CCDS:CCDS17850.1 GeneID:74776 MGI:1922026
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004427 - inorganic diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006796 - phosphate metabolism [Evidence IEA] codon_start : 1 product : inorganic pyrophosphatase 2 protein_id : NP_666253.1

name	E130014J05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94536721 GeneID:214133 MGI:2443298
definition	GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC214133 protein_id : NP_001035490.1

name	EG620205 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82891733 GeneID:620205 MGI:3643755
definition	codon_start : 1 product : hypothetical protein protein_id : XP_900784.1

name	LOC100039168 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251938 GeneID:100039168
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472435.1

name	LOC100039199 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251940 GeneID:100039199
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472487.1

name	Cxxc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138548 CCDS:CCDS17851.1 GeneID:319478 MGI:2442112
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016055 - Wnt receptor signaling pathway [Evidence IPI] codon_start : 1 product : CXXC finger 4 protein_id : NP_001004367.1

name	LOC668857 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668857
definition	number : 1 pseudo : _no_value

name	LOC668862 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668862
definition	number : 1 pseudo : _no_value

name	LOC668858 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251936 GeneID:668858
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins product : similar to heat-shock protein hsp84 pseudo : _no_value transcript_id : XR_030605.1

clone name	MSMg01-479K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173A01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-506L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064G09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-315B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028B05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-393J18.T7 (MSMg01no393_j18.b1)	MSMg01-393J18.TJ (MSMg01no393_j18.g1)
ACC	AG494864	AG494865
length	802	1,550
length of high quality (start - end)	458 (34 - 491)	---
definition	CHROMAT_FILE: MSMg01no393_j18.b1 PHD_FILE: MSMg01no393_j18.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:38:37 2005	CHROMAT_FILE: MSMg01no393_j18.g1 PHD_FILE: MSMg01no393_j18.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:38:37 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CATGTCACTATACGACTCCTATATTCCAGAGGATCCGCGGAATTCTACCA AGGTGTGATTACAGCGCTACCACTAAGTACTTTTAAATTAAGCCGGAGTG CATGGTGGGGCGGGAGAGTACGCCATTCACAAATGTTCTATGTAAAACTT ACACACCAAAGTGACTACTAAGAAAGGACCAAAATAAACAGGAAATGATT ATCCCAAGTCATGCTGCCCTGAAACACTATCCTTGTTCTGAAAACTTTAC ATCCTCAAATACAAGGAGCAAAAATTGTAATCATGACTGGCTCAGAAATA GGGAAGGCTGCTTATATAAACACTGTGTGTGTGGATCTCCTCACCGTTAG AAGGTATTGGCCTTTTGTCTTATGATTTGTCCTTTCCTCAAAGTCCATAG GCAGGATGCACACAGATGTGTGCCTACCTGTGTCCCACACCCACCTCTAC CCACATCTGTGAACCAGGGCAAGGGTTGGAACCTTACCAACGAGTAAGTT TGTAAAAGCAGCTGCCCTCGAAGCTGCGCTGTCACGTGGCCCAGCGCTGG TCACTGGCCTAACTTGCCCCTAAACTTACAGGCCTCTCAATTTTCCCTTC AGAAAAGGGTTTTTAACAACCCCATTTTACAACCATCCTTTCAAATTGGT TATGGAATTTTTATAAAAGAAAAAAACTTACTAAAGTCCCGGGTCTTTCC CACCCTTAATTTTTTGTTCTCAATAGGAATAAGGAAGATACACTCTTGTT ACTAAAAACTCTTCTTCCACNCTGTTCCAACACTCACTTTCCTCATATAT TG	TCTTCTATTCTTTTTGGTGAGGCTCGTGGTCGAGGTCTCTCATCTACTTT CTTTTCGTTNGGTGGTGTTGTCTGTCTNATATGAGACGTTTGTGCGAGTC GCAGGCGTCTGTTATTGTCATCTATCTCATNTATTAGACTNGTAGAAGTG AGCGTGTCGTCATCTTATGCATCAATCACGTAGAGAGACTTATACTATTA ATCGTGACATCTCCACATGTCTGTGTGGTGATTACTCTGTACTGCTCTCT CTCTTCAACGGTAGTGTCTTGCTCGTTACGCTTAACTTAATTAGTTATTA GACAGTATCCATGTACTGCGGAGTGAGTAGTAGATCCACTACAACATAGC TGAGTATCATTCTACTCTCCGTCGCCTTCTTCCTCTCGGCGTCTCATACC TGCACGTACACTCTGTGTGTCTCTTNCTATCACACTTNGTTGCTGTGTAG GTCGAGAGCATAGACGGTGTGACCATGGGCGGTAGAGGTCGTCGTAGTAG TGGAGTCATGCGTCCTACGTGTGGGCTGGTGTACGCATCCATGTGGTTAT GTATTTTGATGTGTCGGGCGGCGCGCGTGTCAATATGATATCAAGTTAGA TATCATCGATAGAGAGTATGACGAGTAACGAATGNTTATTGCATTTCTCA CTCTCTCTACTTCAGTCTCTCAGCTCTGTCAGCTATGCGTGTGGAGTGTT GCGATGCGTCGATCGGTGTATCTCTGCTCTGCATGCGTGTACCTCGAGCT GCGCTACTATGCCGCGACNCATTATTTGGTACGATATGTGTAGTCAGACG TATCGCGCTACGTGACGTCGCTCCTTGTACGTGTGCGGCCTGTAGATGGA TGCTGTAGTATGCAGGACGAGAGCGCATTCTCTCCACACACTCAAGTTAT GCTGCGATGCTCGGCGCGTGTGTACGTGTGCGTCTATACATACATCTATT ACGCATCAGAGATATCGCACAGCGTCACACGCGGAGTCGTTCTATCATAT CCGAGTGTGTNGTAGCTCGTCTAGGTTAGAAATCACGTTGCGTTGTTGCG GTCTGAGATCTCAGTATGATTTCAGTCGCTATGTGCGCCGTGCGTGCNCG GCGTACTTGTCACTGCTCGATGTGTGCTGCCGTGTTATTATGATGCTCAG TCATCGCGTCTAGCGGACACTCTGATGCGTACTACGTGAGGTGTGCTGAC GGCATCTCGCTTGTCTTCGTGATGCTACATACGCGAGTCGTGTATGATGT ATTACGGTAGTTGCAGTAGGTGTGTGANCGACGGTGTATAGTGTGGCTAC GCGTTGTGGCTACTGAATCGTTGTCAGTTTGATCTATGTCGTTGACTTCG CGTTCTGCGCTGTTATGCTTCTGAACCGTANCGCGATTTCACATCTCTAT GTTGACCATATCTTATTACTCGAGTTACTTATATATATCGCTTGGACTTC TGTGTGGTGCGTCGGACGCACACGAGTTCATTCACGCTTCTCCTGACGAC TCTCTTAGNTTATGCCGCGCTGGTCTGCGAGGTATNTGTNATGTAACAGN
quality values	Open. Hide. 6 6 6 6 6 13 9 7 8 10 15 22 27 41 25 21 10 11 11 24 22 21 15 12 10 9 9 9 11 20 19 17 9 10 10 26 33 53 59 39 39 39 39 57 57 57 47 47 43 50 50 27 41 19 28 21 28 28 36 31 40 29 29 29 42 44 57 57 50 50 50 50 47 50 57 54 57 57 57 57 57 57 57 57 57 57 57 57 57 46 57 57 68 57 57 57 57 47 47 48 57 57 57 48 57 57 54 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 68 68 57 57 57 57 57 57 57 68 57 57 52 52 52 57 52 52 54 57 57 68 68 59 59 57 57 52 59 57 57 57 57 57 57 57 57 59 59 57 52 52 52 57 57 57 57 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 59 48 48 48 57 57 68 57 57 57 57 57 57 59 59 59 59 59 68 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 68 68 57 57 57 57 57 57 57 57 68 68 57 59 59 59 59 59 57 43 43 31 37 36 43 47 46 42 39 30 30 39 43 57 57 43 43 40 40 43 43 43 48 48 39 39 35 35 35 43 36 41 41 39 38 37 37 41 41 47 47 47 47 47 43 43 43 43 37 37 37 37 37 41 41 15 9 7 6 6 6 8 8 13 17 25 37 32 31 25 28 28 19 17 10 11 12 11 25 24 29 28 20 10 9 9 14 14 18 35 24 21 10 11 11 8 10 8 10 8 8 8 8 8 9 9 10 10 19 20 18 19 12 10 9 9 10 8 8 9 9 9 9 11 12 22 18 19 11 13 11 18 9 10 8 9 6 6 6 6 8 10 10 10 9 6 6 6 8 13 15 12 10 8 8 8 8 8 13 8 8 8 8 11 8 8 9 8 8 8 8 6 8 6 7 10 6 10 9 12 10 10 10 10 10 12 9 6 8 10 19 15 9 9 6 6 6 8 6 12 10 10 10 10 10 13 15 15 12 8 6 6 6 7 8 6 10 12 10 10 10 8 8 8 8 10 8 9 8 6 6 6 8 8 11 9 8 8 8 10 8 7 7 8 6 6 8 8 11 12 14 13 15 12 15 20 15 8 8 8 10 13 14 14 9 9 9 9 9 8 8 12 10 10 6 8 6 7 8 8 8 8 8 10 7 7 7 8 6 9 10 8 8 8 6 7 7 13 8 8 8 8 6 6 6 6 12 10 12 10 6 6 6 6 6 6 6 6 6 7 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 6 6 8 8 8 8 13 13 16 13 11 11 9 9 9 9 8 8 6 6 8 8 3 0 3 6 6 6 10 10 8 8 7 6 8 8 8 8 8 8 10 11 13 10 10 9 11 11 10 8 8 10 8 6 6	Open. Hide. 6 8 8 8 6 6 6 6 6 6 6 8 8 8 6 7 8 8 8 8 8 6 7 10 8 8 6 6 6 8 6 6 6 6 8 8 8 10 8 8 8 8 8 8 8 6 6 6 10 6 12 10 9 7 9 6 8 6 3 0 3 6 6 8 6 8 8 8 8 8 8 8 8 8 8 8 3 0 3 6 8 8 10 8 8 6 6 6 6 8 8 8 8 8 8 8 6 6 6 6 8 6 6 6 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 11 8 6 6 6 6 10 8 8 8 3 0 3 8 8 6 6 8 8 9 3 0 3 10 10 8 8 8 6 6 6 6 8 8 8 8 6 6 8 8 8 8 6 6 6 6 8 8 11 11 10 9 9 11 10 11 11 10 8 6 6 6 6 6 8 8 8 8 9 8 6 6 6 6 6 6 7 12 9 9 9 10 10 13 10 10 10 7 7 8 8 8 8 8 11 10 10 9 8 8 8 8 9 9 10 7 7 8 8 10 10 10 10 8 6 6 6 8 8 6 6 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 11 10 8 8 8 8 8 8 8 10 10 13 15 10 6 6 8 8 8 8 12 11 10 11 10 10 9 9 9 8 10 8 8 8 8 10 8 9 9 9 10 10 8 9 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 10 10 10 10 10 10 8 8 6 6 6 6 9 10 10 10 8 8 8 8 8 8 9 9 8 6 6 6 6 6 8 8 9 9 9 8 8 6 6 8 6 8 8 8 10 8 8 8 9 8 8 10 10 8 9 9 9 10 9 10 10 10 10 10 11 12 10 9 9 8 8 8 8 8 8 8 6 8 6 8 10 11 8 6 6 6 6 11 10 3 0 3 8 8 8 8 8 8 8 8 9 3 0 3 6 6 6 8 8 8 8 9 8 8 8 10 8 8 9 7 7 7 7 8 8 10 10 11 11 11 11 11 9 10 10 8 6 6 8 8 6 7 8 6 6 8 10 8 8 8 8 9 9 9 6 6 6 6 8 8 10 10 11 11 11 11 11 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 7 7 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 8 6 6 8 8 8 8 8 8 8 9 10 8 8 9 8 8 8 8 8 8 8 6 6 8 6 6 8 6 6 8 6 8 8 8 8 8 9 8 10 9 10 8 11 8 10 10 10 9 6 13 6 6 7 7 8 6 9 8 8 8 10 12 10 8 6 6 6 6 8 6 9 8 8 8 8 8 8 8 8 9 12 8 8 8 8 6 6 6 6 8 6 8 8 8 8 8 3 0 3 8 8 8 6 6 6 8 12 12 8 8 8 8 9 9 6 8 6 6 6 6 7 7 7 8 8 6 6 6 6 6 6 8 8 8 8 8 8 10 10 8 8 8 8 9 9 9 9 8 8 9 9 9 7 9 10 10 10 9 9 9 12 10 17 8 6 6 8 8 8 10 9 6 6 6 6 8 8 8 9 8 10 8 8 8 10 9 13 11 11 10 11 11 11 10 6 8 7 7 8 8 8 8 8 6 6 6 8 6 6 6 6 8 6 6 8 8 10 6 6 6 8 8 6 8 10 8 8 8 8 8 3 0 3 6 8 6 6 6 6 6 7 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 6 8 6 6 8 8 8 8 8 7 7 9 8 8 8 8 8 10 13 17 10 8 6 6 6 6 8 6 7 7 10 10 13 10 10 9 9 10 9 9 10 8 6 6 6 6 6 6 8 8 8 6 7 7 8 12 13 10 9 9 11 13 10 8 6 6 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 6 6 6 6 8 6 8 7 8 8 8 6 6 6 6 8 8 8 8 8 8 8 10 6 7 6 6 8 6 8 6 8 6 6 6 8 6 6 8 10 12 17 10 6 6 8 8 8 8 8 10 8 8 12 8 8 6 6 8 8 20 17 16 11 8 8 6 6 6 6 6 6 6 9 8 8 8 8 8 8 8 8 8 8 8 10 10 10 13 10 9 9 9 8 8 8 8 6 6 6 6 8 6 10 10 8 8 8 8 8 10 8 7 7 8 8 8 8 8 8 8 6 6 6 3 0 3 6 6 6 6 6 6 6 9 6 6 7 7 7 7 6 6 6 6 8 6 6 6 6 6 6 6 6 6 8 6 6 6 6 6 7 6 8 8 6 7 8 8 6 6 6 10 11 8 8 8 8 8 8 8 8 8 8 8 8 6 8 6 6 7 8 8 11 13 10 10 8 8 8 8 8 8 8 8 8 8 8 7 7 7 3 0 3 6 6 6 6 6 6 8 8 6 7 8 8 8 8 8 8 8 8 8 8 8 8 9 8 10 10 6 6 6 8 8 11 6 6 6 6 8 8 8 8 8 8 6 8 6 6 6 6 8 8 8 8 8 8 11 11 9 9 9 9 10 10 8 8 8 8 10 8 8 8 8 8 6 6 6 6 6 6 11 8 8 8 8 8 8 8 6 6 6 6 6 8 6 8 8 8 11 11 8 8 6 6 6 6 10 10 8 8 8 8 8 8 8 8 6 6 8 8 6 6 6 6 6 11 6 6 8 6 8 10 8 8 8 8 8 6 8 8 15 9 9 9 9 12 7 7 6 6 8 6 6 12 8 20 14 12 11 12 10 6 6 6 6 11 6 6 6 6 8 6 9 9 8 8 8 8 8 3 0 3 8 7 7 9 10 10 8 8 8 8 8 8 10 11 8 8 6 6 8 8 8 8 8 9 8 8 8 8 8 8 13 17 11 11 10 10 9 9 8 8 10 8 8 10 10 8 6 6 6 7 8 8 8 8 8 8 8 9 9 10 9 8 8 10 10 10 8 8 8 8 8 8 8 8 6 6 7 6 8 6 8 8 8 8 8 8 8 8 6 6 8 8 6 6 10 7 6 6 6 9 3 0 3 10 8 8 6 6 8 8 6 6 6 6 6 6 8 8 8 8 8 7 7 6 6 6 6 8 9 9 11 15 11 7 7 6 6 8 8 7 9 9 8 8 8 8 6 6 6 6 6 6 6 6 6 8 8 8 8 8 8 8 8 6 6 6 6 9 10 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 9 9 6 6 6 6 6 6 8 6 6 6 6 12 8 8 8 8 6 6 6 6 6 7 13 6 6 6 7 8 8 8 8 8 8 8 10 14 12 11 11 8 6 3 0 3 8 8 7 6 6 6 6 6 8 12 10 10 10 8 8 8 8 8 8 6 6 6 6 8 3 0 3 6 3 0 3 7 8 6 9 9 9 9 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no393_j18.b1 MSMg01no393_j18.b1 CHROMAT_FILE:
MSMg01no393_j18.b1 PHD_FILE: MSMg01no393_j18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:37 2005
         (458 letters)



>mm_chr3_132984463_132985325
          Length = 863

 Score =  845 bits (437), Expect = 0.0
 Identities = 450/457 (98%), Gaps = 5/457 (1%)
 Strand = Plus / Minus

                                                                       
Query: 7   gaattctaccaaggtgtgattacagcgctaccactaagtacttttaaattaagccggagt 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gaattctaccaaggtgtgattacagcgctaccactaagtacttttaaattaagccggagt 604

                                                                       
Query: 67  gcatggtggggcggga-----gagtacgccattcacaaatgttctatgtaaaacttacac 121
           ||||||||||||||||     |||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gcatggtggggcgggaagacggagtacgccattcacaaatgttctatgtaaaacttacac 544

                                                                       
Query: 122 accaaagtgactactaagaaaggaccaaaataaacaggaaatgattatcccaagtcatgc 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 accaaagtgactactaagaaaggaccaaaataaacaggaaatgattatcccaagtcatgc 484

                                                                       
Query: 182 tgccctgaaacactatccttgttctgaaaactttacatcctcaaatacaaggagcaaaaa 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tgccctgaaacactatccttgttctgaaaactttacatcctcaaatacaaggagcaaaaa 424

                                                                       
Query: 242 ttgtaatcatgactggctcagaaatagggaaggctgcttatataaacactgtgtgtgtgg 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ttgtaatcatgactggctcagaaatagggaaggctgcttatataaacactgtgtgtgtgg 364

                                                                       
Query: 302 atctcctcaccgttagaaggtattggccttttgtcttatgatttgtcctttcctcaaagt 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atctcctcaccgttagaaggtattggccttttgtcttatgatttgtcctttcctcaaagt 304

                                                                       
Query: 362 ccataggcaggatgcacacagatgtgtgcctacctgtgtcccacacccacctctacccac 421
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 303 ccataggcaggatgcacacagatgtgtgcctacctgtgtcccacaccgacctctacccac 244

                                                
Query: 422 atctgtgaaccagggcaagggttggaaccttaccaac 458
           |||||||| ||||||||||||||||||||||||||||
Sbjct: 243 atctgtgacccagggcaagggttggaaccttaccaac 207


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 863
Length adjustment: 10
Effective length of query: 448
Effective length of database: 853
Effective search space:   382144
Effective search space used:   382144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information