Query= MSMg01no395_a06.b1 MSMg01no395_a06.b1 CHROMAT_FILE:
MSMg01no395_a06.b1 PHD_FILE: MSMg01no395_a06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:06:42 2005
(381 letters)
>mm_chr3_80760038_80760817
Length = 780
Score = 667 bits (345), Expect = 0.0
Identities = 369/377 (97%), Gaps = 2/377 (0%)
Strand = Plus / Plus
Query: 5 gaattcatctgtatatttttttaaatggcttttcttttgagacagcatctctgtatatag 64
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcatctgcatatttttt-aaatggcttttcttttgagacagcatctctgtatatag 264
Query: 65 tccaggctgtcttgggaatcactgtgtaaactaacctgacctcaaaatcccagagattca 124
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 265 tccaggctgtcttgggaatcactgtgtatactaacctgacctcaaaatcccagagattca 324
Query: 125 cctgcctcagcctcccaaatactgaaattaaagacatacaccactacacactctcatcaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctgcctcagcctcccaaatactgaaattaaagacatacaccactacacactctcatcaa 384
Query: 185 ttttaatttaagattaaaaataaacgctttgggatttttattgtggtttttataggatct 244
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 385 ttttaatttaagattaaaaataaaagctttgggatttttattgtggtttttataggatct 444
Query: 245 atgcaaactttgaagaaaatttactttttttttaatattgtgccttcaaacattgtacca 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 atgcaaactttgaagaaaatttactttttttt-aatattgtgccttcaaacattgtacca 503
Query: 305 tacagtaagtgtacatcatgcctatatttagcttacaggttttggtaatttgattataga 364
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 504 tacaataagtgtacatcatgcctatatttagtttacaggttttggtaatttgattataga 563
Query: 365 tatttgacgtttattga 381
||||||| |||||||||
Sbjct: 564 tatttgatgtttattga 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 780
Length adjustment: 9
Effective length of query: 372
Effective length of database: 771
Effective search space: 286812
Effective search space used: 286812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_a06.g1 MSMg01no395_a06.g1 CHROMAT_FILE:
MSMg01no395_a06.g1 PHD_FILE: MSMg01no395_a06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:06:42 2005
(391 letters)
>mm_chr3_80972206_80972995
Length = 790
Score = 702 bits (363), Expect = 0.0
Identities = 381/387 (98%), Gaps = 1/387 (0%)
Strand = Plus / Minus
Query: 1 tctgaagtggcaatatttagccttcagaaatatgactcatttcactcagataggtaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 551 tctgaagtggcaatatttagccttcagaaatatgactcatttcactcagataggtaa-tt 493
Query: 61 gctacctattagccattagtagattatatgattactgtaattcgcccagtatgagctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gctacctattagccattagtagattatatgattactgtaattcgcccagtatgagctttg 433
Query: 121 tccatgaataaagaggaataaaaaatgatgctccataaaatattaaaaggaattacacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tccatgaataaagaggaataaaaaatgatgctccataaaatattaaaaggaattacacca 373
Query: 181 gtatgatcatagtagtaaactaatcaccaatatggcttagttaattggctactataaatt 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 372 gtatgatcatagtagtaaactaatcaccaaaatggcttagttaattggctactataaatt 313
Query: 241 ggaagcagaagacttccaaatttgagtgaaaagttagataaatgtggaatagaagaaaga 300
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 312 ggaagcagaagacttccaaatttgcgtgaaaagttagataaatgtgaaatagaagaaaga 253
Query: 301 aaatgtaataagaacagagacaacaaatatctttgattgctgatagacttgagtgtgagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 252 aaatgtaataagaacagagacaacaaatatctttgattgctgatagacttgagtgtgggt 193
Query: 361 gtatgcatatgtgtgtgtgtgtgtgtg 387
|||||||| ||||||||||||||||||
Sbjct: 192 gtatgcatgtgtgtgtgtgtgtgtgtg 166
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 790
Length adjustment: 9
Effective length of query: 382
Effective length of database: 781
Effective search space: 298342
Effective search space used: 298342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
