Query= MSMg01no395_c08.b1 MSMg01no395_c08.b1 CHROMAT_FILE:
MSMg01no395_c08.b1 PHD_FILE: MSMg01no395_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:06:53 2005
(441 letters)
>mm_chr3_22715602_22716442
Length = 841
Score = 652 bits (337), Expect = 0.0
Identities = 349/353 (98%)
Strand = Plus / Minus
Query: 9 tcagctctttatctctgcaagggaaaagctttacctgcaaagtcagctctcaacctccta 68
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tcagctctttatgtctgcaagggaaaagctttacctgcaaagtcagctctcaacctccta 294
Query: 69 aacacagtttagctaattaagtttatgatgttttgaaatactaaaaatttcaaagttttg 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aacacagtttagctaattaagtttatgatgttttgaaatactaaaaatttcaaagttttg 234
Query: 129 tatacattttcataataatagaaaagttcaatacagctttatttgcaatacccagaaact 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tatacattttcataataatagaaaagttcaatacagctttatttgcaatacccagaaact 174
Query: 189 ggaaacaatttatataggcccgagttgaagaatcgataaagaaaacatgatatgtttaca 248
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ggaaacaatttacataggcccgagttgaagaatcgataaagaaaacatgatatgtttaca 114
Query: 249 taatggagtattcctcagctgaagctgatatgtctgcaaccctatagttggaacaacaat 308
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 113 taatggagtattcctcagctgaagctgaaaggtctgcaaccctatagttggaacaacaat 54
Query: 309 ataaactaatcattatccccagagctcatgtctctagctgcatatgtagcaga 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ataaactaatcattatccccagagctcatgtctctagctgcatatgtagcaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_c08.g1 MSMg01no395_c08.g1 CHROMAT_FILE:
MSMg01no395_c08.g1 PHD_FILE: MSMg01no395_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:06:53 2005
(349 letters)
>mm_chr3_22582526_22583274
Length = 749
Score = 514 bits (266), Expect = e-150
Identities = 320/346 (92%), Gaps = 13/346 (3%)
Strand = Plus / Plus
Query: 4 gggctaatgatgatgggactaagagcctttggggacctctgaattttgcttgggcaactg 63
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 217 gggctaatgatgatgggactaacagcctttggggacctctgaattttgcttgggtaactg 276
Query: 64 gaaagcacacctgattagcactggtggtctgttaaaaaaataaaagaaacaatatgtggt 123
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 -------------attagcactggtggtctgttaaaaaaataaaagaaacaatatgtggt 323
Query: 124 cctcagctggtcactttccatgaccagaaaaccttcatgcactttaggattatgtatatt 183
||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctcagccagtcactttccatggccagaaaaccttcatgcactttaggattatgtatatt 383
Query: 184 ctaaatgagctaatcaataggaagggggagttctaaataaatacctgaactgaaaattta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctaaatgagctaatcaataggaagggggagttctaaataaatacctgaactgaaaattta 443
Query: 244 tttatgaacacctgagaaagggaaggaagctggcgctactactcatagtcatttctactg 303
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 444 aagatgaacacctgagaaagggaaggaagctggtggtactactcatagtcatttctactg 503
Query: 304 gcagcaggaactctcaaccagaatcgtgcatctctcatgtttggct 349
||||||||||||||||||||||| | ||||| ||||||||||||||
Sbjct: 504 gcagcaggaactctcaaccagaaccatgcatttctcatgtttggct 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
