Query= MSMg01no395_p02.b1 MSMg01no395_p02.b1 CHROMAT_FILE:
MSMg01no395_p02.b1 PHD_FILE: MSMg01no395_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:56 2005
(344 letters)
>mm_chr3_65709729_65710472
Length = 744
Score = 613 bits (317), Expect = e-180
Identities = 338/345 (97%), Gaps = 2/345 (0%)
Strand = Plus / Plus
Query: 1 ccttgtccaggctgtctgaggcacacagagtctaaggcacagggcttgcaaaaggctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttgtccaggctgtctgaggcacacagagtctaaggcacagggcttgcaaaaggctgct 260
Query: 61 ggaaactgaacgggataatggagatttagaattcagacagttccagggctggaatgtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaaactgaacgggataatggagatttagaattcagacagttccagggctggaatgtgct 320
Query: 121 gctaggaaaatgcctggctccagctagcttcaaacagttttgtttcaggttgttactatc 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 gctaggaaaatgcctggctccagctagcttcaagcagttttgtttcaggttgttactatc 380
Query: 181 caggacgttgtgtccaagactaaagagaaatagaacactaagg-gacaggaaattggatt 239
|| |||||||||||||||||||||||||||||||||||||||| | |||||||| |||||
Sbjct: 381 caagacgttgtgtccaagactaaagagaaatagaacactaaggcg-caggaaatcggatt 439
Query: 240 tcaactcccttccatttctcggtgattgttgtctcttgagcattcccatttgttttttgc 299
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 440 tcaactccctcccatttctcggtgattgttgtctcttgagcgttcccatttgttttttgc 499
Query: 300 ctgagtcactctggatggacttatcgaagctcttgagtggaaatt 344
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgagtcactctggatggacttatcgaagctcttgagtggaaatt 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_p02.g1 MSMg01no395_p02.g1 CHROMAT_FILE:
MSMg01no395_p02.g1 PHD_FILE: MSMg01no395_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:56 2005
(390 letters)
>mm_chr3_65917682_65918471
Length = 790
Score = 520 bits (269), Expect = e-152
Identities = 304/320 (95%), Gaps = 9/320 (2%)
Strand = Plus / Minus
Query: 1 atatgggatttcataggtaacagaagaaagatttcaaatcagctaggacaaaattaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atatgggatttcataggtaacagaagaaagatttcaaatcagctaggacaaaattaaata 256
Query: 61 tctataaaatagtgtacagagatgtgactttacaggcttaaaatgtataattaggcctgc 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 255 tctataaaatagtgtacagagatgtaactttacaggcttaaaatgtataattaggcctgc 196
Query: 121 acctcatctgagcagcagagtagagctatggaggcttgggtgactgaatcccaagactgt 180
| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 195 agctcatctgagcagcagagtagagctatggagtcttgggtgagtgaatcccaagactgt 136
Query: 181 gagcacaggagaacaggcctggacatgaggtagcctagcttttggggtgatgccccccac 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 135 gagcacaggagagcaggcctggacatgaggtagcctagcttttggggtgatgccccc-ac 77
Query: 241 cccctta----tttttgccccctgagncagtcaggattgctcacccaagggttatgagaa 296
||||||| | |||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 76 ccccttacccct----gccccctgagtcagtcaggattgctcacccaaaggttatgagaa 21
Query: 297 tgtatgagctggctctgctc 316
||||||||||||||||||||
Sbjct: 20 tgtatgagctggctctgctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
