Query= MSMg01no396_a17.b1 MSMg01no396_a17.b1 CHROMAT_FILE:
MSMg01no396_a17.b1 PHD_FILE: MSMg01no396_a17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:04 2005
(605 letters)
>mm_chr3_119072212_119073217
Length = 1006
Score = 1056 bits (546), Expect = 0.0
Identities = 582/594 (97%), Gaps = 1/594 (0%)
Strand = Plus / Minus
Query: 13 gaattctggagaggttgatatgactttcatggatttgaagtttccacctaacttacttt- 71
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gaattctggataggttgatatgactttcatggatttgaagtttccacctaacttactttc 747
Query: 72 ccccccaggaacttcccactgccatagcaggattcagtgtttcatgctttctggaaaata 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ccccccaggaacttcccactgccatagcaggattcagtgtttcatgctttctggaaaata 687
Query: 132 tgaatagttctgaaagataagagaacatcaggtatttgggtggatcattgagtaatagtc 191
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 686 tgaatagttctgaaagataagagaacatcaggtatgtggatggatcattgagtaatagtc 627
Query: 192 tgaatttctcaaagacatggtctgagaggataaaatactaccattaaggaatacctgcca 251
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgtatttctcaaagacatggtctgagaggataaaatactaccattaaggaatacctgcca 567
Query: 252 gatctgtgtctctctcgtgttttcatagtgtgcagctggcatgcttactttaatactgct 311
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 566 gatctgtgtctctctcgtgttttcatagtgtgctgctggcatgcttattttaatactgct 507
Query: 312 gtttggcgagcactgtcttttatgttttcttttttaaatgcttgtatctaactgtaatat 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gtttggcgagcactgtcttttatgttttcttttttaaatgcttgtatctaactgtaatat 447
Query: 372 tctgagcactcaaagcacactgcaagggataaacccattcatgctaagactgcagcagca 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tctgagcactcaaagcacactgcaagggataaacccattcatgctaagactgcagcagca 387
Query: 432 tagcacagaggaggaaaccacatcttcatccttgaagcatcttatagcactctacatgat 491
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 386 tagtacagaggaggaaaccacatcttcatccttgaagcatcttgtagcactctacatgat 327
Query: 492 attttcaaagaacttataatgaacagacctggcaatattcctttccatgtcaatgcttgc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 attttcaaagaacttataatgaacagacctggcaatattcctttccatgtcaatgcttgc 267
Query: 552 aaggtgagtggtcttagttggaacatatttaaataaaaatgagctataatccac 605
||| ||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 266 aagctgagtggtcctagttggaacatatttaaataaaaataagctataatccac 213
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1006
Length adjustment: 10
Effective length of query: 595
Effective length of database: 996
Effective search space: 592620
Effective search space used: 592620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_a17.g1 MSMg01no396_a17.g1 CHROMAT_FILE:
MSMg01no396_a17.g1 PHD_FILE: MSMg01no396_a17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:04 2005
(450 letters)
>mm_chr3_118986653_118987502
Length = 850
Score = 777 bits (402), Expect = 0.0
Identities = 433/450 (96%), Gaps = 11/450 (2%)
Strand = Plus / Plus
Query: 1 agacaatgtataagtttaagggctgtaaaatggagttaagggaattgctatcaaaatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacaatgtataagtttaagggctgtaaaatggagttaagggaattgctatcaaaatatc 260
Query: 61 tgtgttttcattgacttccaatacataattcagaggccaagcttatccacatgaccttat 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgttttcattgacttccaatacaaaattcagaggccaagcttatccacatgaccttat 320
Query: 121 gactctagtctacactagtcacagaatcaggctctcgttgaaatacatgcttttggacac 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 gactctagtctacactagtcacagaatcaggctctggttgaaatacatgcttttggacac 380
Query: 181 atagaaaaaataattacagcttgaattttgatacaagtgctgataagatggtttgatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagaaaaaataattacagcttgaattttgatacaagtgctgataagatggtttgatgga 440
Query: 241 tggtaccagttgataagcctgggatatattcccgaatcctctacattggataataaaaat 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cggtaccagttgataagcctgggatatattcccgaatcctctacattggataataaaaat 500
Query: 301 caactgctgaaggttgtcctctgaccctcacatgtgtcctctgtccctcacatgcatttg 360
||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 501 caactgctgaaggttgtcctctgaccctcacatgtgtatt-----------atgcatttg 549
Query: 361 cacacatgtacatacacagaaatgtaaaaatacttttgatacaaacataaggaaatatga 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 550 cacacatgtacatacacagaaatgtaaaaatacttttgatataaacataaggaaatatga 609
Query: 421 atatgtatatgatcagtagtagttttgtgt 450
||||||||||||||||||||||||||||||
Sbjct: 610 atatgtatatgatcagtagtagttttgtgt 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
