XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTAGA
AGCTACCGGGCCAACTAGCAAGGATACTATAGTAGTGAATAAAAGAGACT
TTGTCTCAAACAAAGTGCAAGGTTAATACCTGAACCTAACACCTAATGTT
AATTAGCCACTGAGTCTCTAGTGTCTAATCTTAGCCATCAACTCTGCATA
CCTGTGAGGAGACAAGTGTGAGGAGTTGAAGATTTACCTCCATCAGTTTG
GCCAGTGGTTATTTCTGTGAGACATTTTCTGAAGTTGCTAATTGATATAG
GAGGTCCCAGATCTCCATGGGCAAGGAAGAGTGATCTACATATGAAAGAT
AAACTAAGGGGAATAGAATAAGCCATCATGCAAATTCCTGCCTGGGTTTT
CCTCAGTTATGAACTGTGGTCTGTAAGCTAAATAGACCCTTTCCTTCCCA
ATTTGGATTTAGTCGTGGTGTTTTATTACAGCAACAGAAAGCAAACTAGA
ACATCTGACTTCTACATGTGTCTCTGAACATACATACCTGCATACNCATA
CACCCATTAAACACCCCCCCCCACATGCTTATACACATCCCTATTTCCCA
ACCACCCCCTATTTACCTTGTCAGAAATGAAACTTTGAAAAACTTTCTTA
TGAATGACTGAACCCCTTGTGTTTTTTTTGGTGTATGGGCATCCACGCGT
CTCTTACGGAAATTTAAAAAAACCCTCCTTTTTTTGTTAATTTACCGCAC
TTTCTCCTCCA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCAAAACTGGAATACTGAATGGCTTAGAAGTACCT
AAAGAAGTGTTTAACATTCTTTGTCATGAGGGGAATGCAAATCAAAGCAA
CCCTGAGATTCTACTTCATACAGGTCAAATGGCTAAGATCAGAAACTCAG
GTGACAGCAGATGCTGAAGATGTAGAGAAAGAGGAACACTCCTCCACTGC
TGGTGGGATTGCAAGTGGTACAACCACTCTAGAAATCAGTTTCGTGGTTC
TTCAGAAAATTGTTTATAGTACTACCTGAGGATCCACTAATGCCATTGCT
GGGGATATACCCAGAGAATGCTCCAACATGTAATAAGGACACATGCTCCA
CTATGTTCATAGCAGTTTTATTTATAATAACCAGAAGATGGTAAGAACCC
AGATGTCCCCCAACAGAGGAATGGACACAGAAATTGCGATACATTTACTC
AATGCAATACTGCTCAGCTATTGATACCAATGAACTTATGAAATTCTTAC
GTAAACGCATGGAACCACAATATGCTGTGCTGAGTGATATAACCTATTCT
CCCAAGTACCCACTTGGCATGCCCTCATTGATCACTGCTTATTCACCTTT
ATCCCCCTTTACCCCATATCACCTTTCTTAATCCTATGCACTTTCTTTAC
ATACGCCCTACCCCCCCTTGGTCTTTTCTCTTTTTTCTT

Query= MSMg01no396_c14.b1 MSMg01no396_c14.b1 CHROMAT_FILE:
MSMg01no396_c14.b1 PHD_FILE: MSMg01no396_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:13 2005
         (474 letters)



>mm_chr3_120121761_120122634
          Length = 874

 Score =  909 bits (470), Expect = 0.0
 Identities = 473/474 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaactagcaaggatactatagtagtgaataaaagagactttgtctcaaacaaagtgcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaactagcaaggatactatagtagtgaataaaagagactttgtctcaaacaaagtgcaa 260

                                                                       
Query: 61  ggttaatacctgaacctaacacctaatgttaattagccactgagtctctagtgtctaatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttaatacctgaacctaacacctaatgttaattagccactgagtctctagtgtctaatc 320

                                                                       
Query: 121 ttagccatcaactctgcatacctgtgaggagacaagtgtgaggagttgaagatttacctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagccatcaactctgcatacctgtgaggagacaagtgtgaggagttgaagatttacctc 380

                                                                       
Query: 181 catcagtttggccagtggttatttctgtgagacattttctgaagttgctaattgatatag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcagtttggccagtggttatttctgtgagacattttctgaagttgctaattgatatag 440

                                                                       
Query: 241 gaggtcccagatctccatgggcaaggaagagtgatctacatatgaaagataaactaaggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggtcccagatctccatgggcaaggaagagtgatctacatatgaaagataaactaaggg 500

                                                                       
Query: 301 gaatagaataagccatcatgcaaattcctgcctgggttttcctcagttatgaactgtggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaatagaataagccatcatgcaaattcctgcctgggttttcctcagttatgaactgtggt 560

                                                                       
Query: 361 ctgtaagctaaatagaccctttccttcccaatttggatttagtcgtggtgttttattaca 420
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 ctgtaagctaaatagaccctttccttcccaatttggatttagtcatggtgttttattaca 620

                                                                 
Query: 421 gcaacagaaagcaaactagaacatctgacttctacatgtgtctctgaacataca 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcaacagaaagcaaactagaacatctgacttctacatgtgtctctgaacataca 674


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space:   400896
Effective search space used:   400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)