Query= MSMg01no396_g10.b1 MSMg01no396_g10.b1 CHROMAT_FILE:
MSMg01no396_g10.b1 PHD_FILE: MSMg01no396_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:31 2005
(166 letters)
>mm_chr3_55428726_55429291
Length = 566
Score = 306 bits (158), Expect = 6e-88
Identities = 164/166 (98%)
Strand = Plus / Minus
Query: 1 gcctcggtgacacgcattccttacgctgctgccccttgaacttgaaagatcagcattgct 60
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 366 gcctcggtgacatgcattccttacgctgctgccccttgaatttgaaagatcagcattgct 307
Query: 61 tcctgtgagggtctcacatgcaaaaccatgaacagaactgtagtaaagccagcggtcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tcctgtgagggtctcacatgcaaaaccatgaacagaactgtagtaaagccagcggtcttc 247
Query: 121 ttgtccactgccaggaatgtgggcaacaggggccacaggggacagg 166
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttgtccactgccaggaatgtgggcaacaggggccacaggggacagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 566
Length adjustment: 8
Effective length of query: 158
Effective length of database: 558
Effective search space: 88164
Effective search space used: 88164
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no396_g10.g1 MSMg01no396_g10.g1 CHROMAT_FILE:
MSMg01no396_g10.g1 PHD_FILE: MSMg01no396_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:31 2005
(242 letters)
>mm_chr3_55215183_55215818
Length = 636
Score = 441 bits (228), Expect = e-128
Identities = 236/242 (97%), Gaps = 6/242 (2%)
Strand = Plus / Plus
Query: 1 tctacttaagaaagaattgaattgctagatccaaagattttaactgtgtgggatgctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctacttaagaaagaattgaattgctagatccaaagattttaactgtgtgggatgctgaa 260
Query: 61 gctgttaaaattagtgccagctctgttgtaaatgttgtgatccttcagaaatctgcctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgttaaaattagtgccagctctgttgtaaatgttgtgatccttcagaaatctgcctaa 320
Query: 121 gacaaagacaaggctacaactcaagagagataatttacttttgatatacattattttaat 180
||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 gacaaagacaaggctacaactcaagagagataatttacttt------acattattttaat 374
Query: 181 atacaatatactgtacatatgtatgcttgcatgaatttatgtgcagcacatacatgtagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 atacaatatactgtacatatgtatgcttgcatgaatttatgtgcagcacatacatgtagt 434
Query: 241 gc 242
||
Sbjct: 435 gc 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 636
Length adjustment: 9
Effective length of query: 233
Effective length of database: 627
Effective search space: 146091
Effective search space used: 146091
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
